RCSB PDB: Search

7UBJ	Download File View File

Transcription antitermination factor Qlambda, type-I crystal

(2022) Proc Natl Acad Sci U S A 119: e2205278119-e2205278119

Released	2022-09-28
Method	X-RAY DIFFRACTION 1.46 Å
Organisms	Escherichia phage Lambda
Macromolecule	Antitermination protein Q (protein)
Unique Ligands	CL, EDO, GOL, PEG, PO4, ZN

7UBK	Download File View File

Transcription antitermination factor Qlambda, type-II crystal

(2022) Proc Natl Acad Sci U S A 119: e2205278119-e2205278119

Released	2022-09-28
Method	X-RAY DIFFRACTION 1.97 Å
Organisms	Escherichia phage Lambda
Macromolecule	Antitermination protein Q (protein)
Unique Ligands	CL, EDO, GOL, PEG, ZN

7UBL	Download File View File

Transcription antitermination factor Qlambda in complex with Q-lambda-binding-element DNA

(2022) Proc Natl Acad Sci U S A 119: e2205278119-e2205278119

Released	2022-09-28
Method	X-RAY DIFFRACTION 2.177 Å
Organisms	Escherichia phage Lambda
Macromolecule	Antitermination protein Q (protein) DNA (5'-D(PCPAPCPCPCPAPAPTPTPTPTPAPTPTPCPAPAPTPG)-3') (nucleic acid) DNA (5'-D(PCPAPTPTPGPAPAPTPAPAPAPAPTPTPGPGPGPTPG)-3') (nucleic acid)
Unique Ligands	EDO, ZN

7UBM	Download File View File

Transcription antitermination complex: "pre-engaged" Qlambda-loading complex

(2022) Proc Natl Acad Sci U S A 119: e2205278119-e2205278119

Released	2022-09-28
Method	ELECTRON MICROSCOPY 3.13 Å
Organisms	Escherichia coli Escherichia phage Lambda
Macromolecule	Unique protein chains: 6 Unique nucleic acid chains: 3
Unique Ligands	MG, ZN

7UBN	Download File View File

Transcription antitermination complex: NusA-containing "engaged" Qlambda-loading complex

(2022) Proc Natl Acad Sci U S A 119: e2205278119-e2205278119

Released	2022-09-28
Method	ELECTRON MICROSCOPY 3.36 Å
Organisms	Escherichia coli Escherichia phage Lambda
Macromolecule	Unique protein chains: 7 Unique nucleic acid chains: 3
Unique Ligands	MG, ZN

8FIX	Download File View File

Cryo-EM structure of E. coli RNA polymerase backtracked elongation complex harboring a terminal mismatch

Florez Ariza, A., Wee, L., Tong, A., Canari, C., Grob, P., Nogales, E., Bustamante, C.

(2023) Cell 186: 1244-1262.e34

Released	2023-03-29
Method	ELECTRON MICROSCOPY 3.9 Å
Organisms	Escherichia coli K-12 Escherichia phage Lambda
Macromolecule	Unique protein chains: 4 Unique nucleic acid chains: 3
Unique Ligands	MG, ZN

8FIY	Download File View File

Cryo-EM structure of E. coli RNA polymerase Elongation complex in the Transcription-Translation Complex (RNAP in an anti-swiveled conformation)

Florez Ariza, A., Wee, L., Tong, A., Canari, C., Grob, P., Nogales, E., Bustamante, C.

(2023) Cell 186: 1244-1262.e34

Released	2023-03-29
Method	ELECTRON MICROSCOPY 7.3 Å
Organisms	Escherichia coli K-12 Escherichia phage Lambda
Macromolecule	Unique protein chains: 3 Unique nucleic acid chains: 3
Unique Ligands	MG, ZN

8FIZ	Download File View File

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Florez Ariza, A., Wee, L., Tong, A., Canari, C., Grob, P., Nogales, E., Bustamante, C.

(2023) Cell 186: 1244-1262.e34

Released	2023-03-29
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Escherichia coli Escherichia phage Lambda
Macromolecule	Unique protein chains: 51 Unique nucleic acid chains: 5

8GMU	Download File View File

Structure of lambda repressor in complex with RecA filament

Gao, B., Feng, Y.

(2023) Proc Natl Acad Sci U S A 120: e2217493120-e2217493120

Released	2022-12-21
Method	ELECTRON MICROSCOPY 2.78 Å
Organisms	Escherichia coli Escherichia phage Lambda
Macromolecule	Protein RecA (protein) Repressor protein cI (protein) DNA (5'-D(PTPTPTPTPTPT)-3') (nucleic acid)
Unique Ligands	AGS, MG

8IYD	Download File View File

Tail cap of phage lambda tail

Wang, J.W., Wang, C.

(2024) Structure 32: 35

Released	2023-10-18
Method	ELECTRON MICROSCOPY 3.1 Å
Organisms	Escherichia phage Lambda
Macromolecule	Tail tube protein (protein) Tail tube terminator protein (protein)

8IYK	Download File View File

Tail tip conformation 1 of phage lambda tail

Wang, J.W., Wang, C.

(2024) Structure 32: 35

Released	2023-10-18
Method	ELECTRON MICROSCOPY 2.95 Å
Organisms	Escherichia phage Lambda
Macromolecule	Unique protein chains: 6
Unique Ligands	SF4

8IYL	Download File View File

Tail tip conformation 2 of phage lambda tail

Wang, J.W., Wang, C.

(2024) Structure 32: 35

Released	2023-10-18
Method	ELECTRON MICROSCOPY 3 Å
Organisms	Escherichia phage Lambda
Macromolecule	Unique protein chains: 6
Unique Ligands	SF4

8JVM	Download File View File

AHS-CSF domains of phage lambda tail

Wang, J.

(2024) Structure 32: 35

Released	2023-10-18
Method	ELECTRON MICROSCOPY 3.86 Å
Organisms	Escherichia phage Lambda
Macromolecule	Tip attachment protein J (protein)

8K35	Download File View File

Structure of the bacteriophage lambda tail tip complex

(2023) PLoS Biol 21: e3002441-e3002441

Released	2023-11-15
Method	ELECTRON MICROSCOPY 3.44 Å
Organisms	Escherichia phage Lambda
Macromolecule	Unique protein chains: 6
Unique Ligands	SF4

8K36	Download File View File

Structure of the bacteriophage lambda tail tube

(2023) PLoS Biol 21: e3002441-e3002441

Released	2023-11-15
Method	ELECTRON MICROSCOPY 3.48 Å
Organisms	Escherichia phage Lambda
Macromolecule	Tail tube protein (protein)

8K37	Download File View File

Structure of the bacteriophage lambda neck

(2023) PLoS Biol 21: e3002441-e3002441

Released	2023-11-15
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Escherichia phage Lambda
Macromolecule	Head-tail connector protein FII (protein) Tail tube protein (protein) Tail tube terminator protein (protein)

8K38	Download File View File

The structure of bacteriophage lambda portal-adaptor

(2023) PLoS Biol 21: e3002441-e3002441

Released	2023-11-15
Method	ELECTRON MICROSCOPY 3.2 Å
Organisms	Escherichia phage Lambda
Macromolecule	Head completion protein (protein) Portal protein B (protein)

8K39	Download File View File

Structure of the bacteriophage lambda portal vertex

(2023) PLoS Biol 21: e3002441-e3002441

Released	2023-11-15
Method	ELECTRON MICROSCOPY 4 Å
Organisms	Escherichia phage Lambda
Macromolecule	Major capsid protein (protein) Portal protein B (protein)

8KGE	Download File View File

Dimeric tail tube protein gpVs of bacteriophage lambda

Wang, J.W.

(2024) Structure 32: 35

Released	2023-10-18
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Escherichia phage Lambda
Macromolecule	Tail tube protein (protein)

8SPQ	Download File View File

SpRY-Cas9:gRNA complex targeting TGG PAM DNA

(2024) Nat Commun 15: 3663-3663

Released	2024-05-01
Method	ELECTRON MICROSCOPY 3.26 Å
Organisms	Escherichia phage Lambda Streptococcus pyogenes Streptococcus pyogenes serotype M1
Macromolecule	CRISPR-associated endonuclease Cas9/Csn1 (protein) NTS (nucleic acid) TS (nucleic acid) gRNA (nucleic acid)
Unique Ligands	MG

8SQH	Download File View File

SpRY-Cas9:gRNA complex targeting TTC PAM DNA

(2024) Nat Commun 15: 3663-3663

Released	2024-05-01
Method	ELECTRON MICROSCOPY 3.69 Å
Organisms	Escherichia phage Lambda Streptococcus pyogenes
Macromolecule	CRISPR-associated endonuclease Cas9/Csn1 (protein) NTS (nucleic acid) TS (nucleic acid) gRNA (nucleic acid)
Unique Ligands	MG

8SRS	Download File View File

SpRY-Cas9:gRNA complex targeting TAC PAM DNA

(2024) Nat Commun 15: 3663-3663

Released	2024-05-01
Method	ELECTRON MICROSCOPY 2.79 Å
Organisms	Escherichia phage Lambda Streptococcus pyogenes
Macromolecule	CRISPR-associated endonuclease Cas9/Csn1 (protein) NTS (nucleic acid) TS (nucleic acid) gRNA (nucleic acid)
Unique Ligands	MG

8T6O	Download File View File

SpRY-Cas9:gRNA complex targeting TAC PAM DNA with 0 bp R-loop

(2024) Nat Commun 15: 3663-3663

Released	2024-05-01
Method	ELECTRON MICROSCOPY 3.1 Å
Organisms	Escherichia phage Lambda Streptococcus pyogenes
Macromolecule	CRISPR-associated endonuclease Cas9/Csn1 (protein) NTS (nucleic acid) TS (nucleic acid) gRNA (nucleic acid)

8T6P	Download File View File

SpRY-Cas9:gRNA complex targeting TAC PAM DNA with 2 bp R-loop

(2024) Nat Commun 15: 3663-3663

Released	2024-05-01
Method	ELECTRON MICROSCOPY 3.15 Å
Organisms	Escherichia phage Lambda Streptococcus pyogenes
Macromolecule	CRISPR-associated endonuclease Cas9/Csn1 (protein) NTS (nucleic acid) TS (nucleic acid) gRNA (nucleic acid)

8T6S	Download File View File

SpRY-Cas9:gRNA complex targeting TAC PAM DNA with 10 bp R-loop