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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Klebsiella pneumoniae"

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Search Summary

This query matches 42 Structures.

Refinements

Structure Determination Methodology

experimental (42)

Scientific Name of Source Organism

	Trametes ochracea (35)
	Peniophora sp. SG (3)
	Phanerodontia chrysosporium (3)
	Oscillatoria princeps RMCB-10 (1)

Taxonomy

	Eukaryota (41)
	Bacteria (1)

Experimental Method

X-RAY DIFFRACTION (42)

Polymer Entity Type

Protein (42)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (27)
	2.0 - 2.5 (11)
	2.5 - 3.0 (2)

Release Date

	2000 - 2004 (1)
	2005 - 2009 (11)
	2010 - 2014 (29)
	2020 - 2024 (1)

Enzyme Classification Name

Oxidoreductases (42)

Symmetry Type

Dihedral (42)

SCOP Classification

	Alpha and beta proteins (a+b) (5)
	Alpha and beta proteins (a/b) (5)

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1 to 25 of 42 Structures

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1TT0 \| pdb_00001tt0	Download File View File

Crystal Structure of Pyranose 2-Oxidase

Hallberg, B.M., Leitner, C., Haltrich, D., Divne, C.

(2004) J Mol Biology 341: 781-796

Released	2005-06-21
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Trametes ochracea
Macromolecule	pyranose oxidase (protein)
Unique Ligands	12P, ACT, FAD

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1TZL \| pdb_00001tzl	Download File View File

Crystal Structure of Pyranose 2-Oxidase from the White-Rot Fungus Peniophora sp.

Bannwarth, M., Bastian, S., Heckmann-Pohl, D., Giffhorn, F., Schulz, G.E.

(2004) Biochemistry 43: 11683-11690

Released	2004-10-19
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Peniophora sp. SG
Macromolecule	pyranose oxidase (protein)
Unique Ligands	FAD

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2F5V \| pdb_00002f5v	Download File View File

Reaction geometry and thermostability mutant of pyranose 2-oxidase from the white-rot fungus Peniophora sp.

Bannwarth, M., Bastian, S., Heckmann-Pohl, D., Giffhorn, F., Schulz, G.E.

(2006) Biochemistry 45: 6587-6595

Released	2006-06-13
Method	X-RAY DIFFRACTION 1.41 Å
Organisms	Peniophora sp. SG
Macromolecule	Pyranose 2-oxidase (protein)
Unique Ligands	FAD, KBG, PEG, PG4

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2F6C \| pdb_00002f6c	Download File View File

Reaction geometry and thermostability of pyranose 2-oxidase from the white-rot fungus Peniophora sp., Thermostability mutant E542K

Bannwarth, M., Heckmann-Pohl, D.M., Bastian, S., Giffhorn, F., Schulz, G.E.

(2006) Biochemistry 45: 6587-6595

Released	2006-06-13
Method	X-RAY DIFFRACTION 1.84 Å
Organisms	Peniophora sp. SG
Macromolecule	Pyranose 2-oxidase (protein)
Unique Ligands	FAD, PEG, PG4

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2IGK \| pdb_00002igk	Download File View File

Crystal structure of recombinant pyranose 2-oxidase

Divne, C.

(2006) J Biological Chem 281: 35104-35115

Released	2006-10-10
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Trametes ochracea
Macromolecule	Pyranose oxidase (protein)
Unique Ligands	FAD, MES

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2IGM \| pdb_00002igm	Download File View File

Crystal structure of recombinant pyranose 2-oxidase H548N mutant

Divne, C.

(2006) J Biological Chem 281: 35104-35115

Released	2006-10-10
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Trametes ochracea
Macromolecule	Pyranose oxidase (protein)
Unique Ligands	FAD, MES

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2IGN \| pdb_00002ign	Download File View File

Crystal structure of recombinant pyranose 2-oxidase H167A mutant

Divne, C.

(2006) J Biological Chem 281: 35104-35115

Released	2006-10-10
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Trametes ochracea
Macromolecule	Pyranose oxidase (protein)
Unique Ligands	FAD, MES

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2IGO \| pdb_00002igo	Download File View File

Crystal structure of pyranose 2-oxidase H167A mutant with 2-fluoro-2-deoxy-D-glucose

Divne, C.

(2006) J Biological Chem 281: 35104-35115

Released	2006-10-10
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Trametes ochracea
Macromolecule	Pyranose oxidase (protein)
Unique Ligands	FAD, SHG

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3BG6 \| pdb_00003bg6	Download File View File

Pyranose 2-oxidase from Trametes multicolor, E542K mutant

Tan, T.C., Divne, C.

(2009) FEBS J 276: 776-792

Released	2008-12-02
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Trametes ochracea
Macromolecule	Pyranose oxidase (protein)
Unique Ligands	FAD

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3BG7 \| pdb_00003bg7	Download File View File

Pyranose 2-oxidase from Trametes multicolor, L537G mutant

Norberg, P., Tan, T.C., Divne, C.

(2009) FEBS J 276: 776-792

Released	2008-12-02
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Trametes ochracea
Macromolecule	Pyranose oxidase (protein)
Unique Ligands	FAD

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3BLY \| pdb_00003bly	Download File View File

Pyranose 2-oxidase from Trametes multicolor, E542K/L537W

Tan, T.C., Divne, C.

(2009) FEBS J 276: 776-792

Released	2008-12-02
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Trametes ochracea
Macromolecule	Pyranose oxidase (protein)
Unique Ligands	FAD, MES

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3FDY \| pdb_00003fdy	Download File View File

Pyranose 2-oxidase thermostable triple mutant, T169G/E542K/V546C

Tan, T.C., Divne, C.

(2009) Biotechnol J 4: 525-534

Released	2009-03-31
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Trametes ochracea
Macromolecule	Pyranose oxidase (Pyranose 2-oxidase) (protein)
Unique Ligands	FAD, MES

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3K4B \| pdb_00003k4b	Download File View File

Pyranose 2-oxidase T169S mutant

Divne, C., Tan, T.C.

(2010) J Biological Chem 285: 9697-9705

Released	2010-02-02
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Trametes ochracea
Macromolecule	Pyranose 2-oxidase (protein)
Unique Ligands	FAD

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3K4C \| pdb_00003k4c	Download File View File

Pyranose 2-oxidase H167A/T169G mutant

Divne, C., Tan, T.C.

(2010) J Biological Chem 285: 9697-9705

Released	2010-02-02
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Trametes ochracea
Macromolecule	Pyranose 2-oxidase (protein)
Unique Ligands	1PE, FAD, MES

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3K4J \| pdb_00003k4j	Download File View File

Pyranose 2-oxidase H450Q mutant

Divne, C., Tan, T.C.

(2010) FEBS J 277: 2892-2909

Released	2010-05-12
Method	X-RAY DIFFRACTION 2 Å
Organisms	Trametes ochracea
Macromolecule	Pyranose 2-oxidase (protein)
Unique Ligands	FAD, MES

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3K4K \| pdb_00003k4k	Download File View File

Pyranose 2-oxidase F454N mutant

Divne, C., Tan, T.C.

(2010) FEBS J 277: 2892-2909

Released	2010-05-12
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Trametes ochracea
Macromolecule	Pyranose 2-oxidase (protein)
Unique Ligands	FAD

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3K4L \| pdb_00003k4l	Download File View File

Pyranose 2-oxidase F454N mutant in complex with 2FG

Divne, C., Tan, T.C.

(2010) FEBS J 277: 2892-2909

Released	2010-05-12
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Trametes ochracea
Macromolecule	Pyranose 2-oxidase (protein)
Unique Ligands	FAD, MES, SHG

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3K4M \| pdb_00003k4m	Download File View File

Pyranose 2-oxidase Y456W mutant in complex with 2FG

Divne, C., Tan, T.C.

(2010) FEBS J 277: 2892-2909

Released	2010-05-12
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Trametes ochracea
Macromolecule	Pyranose 2-oxidase (protein)
Unique Ligands	FAD, MES, SHG

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3K4N \| pdb_00003k4n	Download File View File

Pyranose 2-oxidase F454A/S455A/Y456A mutant

Divne, C., Tan, T.C.

(2010) FEBS J 277: 2892-2909

Released	2010-05-12
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Trametes ochracea
Macromolecule	Pyranose 2-oxidase (protein)
Unique Ligands	FAD

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3LSH \| pdb_00003lsh	Download File View File

Pyranose 2-oxidase T169A, monoclinic

Divne, C., Tan, T.C., Spadiut, O.

(2010) J Mol Biology 402: 578-594

Released	2010-08-25
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Trametes ochracea
Macromolecule	Pyranose 2-oxidase (protein)
Unique Ligands	FAD, MES

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3LSI \| pdb_00003lsi	Download File View File

Pyranose 2-oxidase T169A, tetragonal

Tan, T.C., Spadiut, O., Divne, C.

(2010) J Mol Biology 402: 578-594

Released	2010-08-25
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Trametes ochracea
Macromolecule	Pyranose 2-oxidase (protein)
Unique Ligands	FAD

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3LSK \| pdb_00003lsk	Download File View File

Pyranose 2-oxidase T169S acetate complex

Tan, T.C., Spadiut, O., Divne, C.

(2010) J Mol Biology 402: 578-594

Released	2010-08-25
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Trametes ochracea
Macromolecule	Pyranose 2-oxidase (protein)
Unique Ligands	12P, ACT, FAD

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3LSM \| pdb_00003lsm	Download File View File

Pyranose 2-oxidase H167A mutant with flavin N(5) sulfite adduct

Tan, T.C., Spadiut, O., Divne, C.

(2010) J Mol Biology 402: 578-594

Released	2010-08-25
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Trametes ochracea
Macromolecule	Pyranose 2-oxidase (protein)
Unique Ligands	12P, GLC, SFD, SO3

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3PL8 \| pdb_00003pl8	Download File View File

Pyranose 2-oxidase H167A complex with 3-deoxy-3-fluoro-beta-D-glucose

Tan, T.C., Divne, C.

(2011) J Mol Biology 409: 588-600

Released	2011-04-27
Method	X-RAY DIFFRACTION 1.35 Å
Organisms	Trametes ochracea
Macromolecule	Pyranose 2-oxidase (protein)
Unique Ligands	FAD, G3F, MES

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4MIF \| pdb_00004mif	Download File View File

Pyranose 2-oxidase from Phanerochaete chrysosporium, wild type from natural source

Hassan, N., Tan, T.C., Spadiut, O., Pisanelli, I., Fusco, L., Haltrich, D., Peterbauer, C., Divne, C.

(2013) FEBS Open Bio 3: 496-504

Released	2013-12-11
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Phanerodontia chrysosporium
Macromolecule	Pyranose 2-oxidase (protein)
Unique Ligands	FDA, MG

1 to 25 of 42 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1TT0 | pdb_00001tt0

1TZL | pdb_00001tzl

2F5V | pdb_00002f5v

2F6C | pdb_00002f6c

2IGK | pdb_00002igk

2IGM | pdb_00002igm

2IGN | pdb_00002ign

2IGO | pdb_00002igo

3BG6 | pdb_00003bg6

3BG7 | pdb_00003bg7

3BLY | pdb_00003bly

3FDY | pdb_00003fdy

3K4B | pdb_00003k4b

3K4C | pdb_00003k4c

3K4J | pdb_00003k4j

3K4K | pdb_00003k4k

3K4L | pdb_00003k4l

3K4M | pdb_00003k4m

3K4N | pdb_00003k4n

3LSH | pdb_00003lsh

3LSI | pdb_00003lsi

3LSK | pdb_00003lsk

3LSM | pdb_00003lsm

3PL8 | pdb_00003pl8

4MIF | pdb_00004mif