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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Enzyme Classification Number = 2.5.1.1

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Search Summary

This query matches 172 Structures.

Refinements

Structure Determination Methodology

experimental (172)

Scientific Name of Source Organism

	Homo sapiens (95)
	Saccharomyces cerevisiae (24)
	Phaedon cochleariae (15)
	Mentha x piperita (7)
	Leishmania major (6)
	Gallus gallus (5)
	Arabidopsis thaliana (3)
	Mycobacterium tuberculosis (3)
	Corynebacterium glutamicum (2)
	Picosynechococcus sp. PCC 7002 (2)

More...

Taxonomy

	Eukaryota (159)
	Bacteria (9)
	Archaea (3)
	Varidnaviria (1)

Experimental Method

	X-RAY DIFFRACTION (172)
	NEUTRON DIFFRACTION (2)

Polymer Entity Type

Protein (172)

Refinement Resolution (Å)

	1.0 - 1.5 (6)
	1.5 - 2.0 (39)
	2.0 - 2.5 (97)
	2.5 - 3.0 (27)
	3.0 - 3.5 (4)
	3.5 - 4.0 (1)

Release Date

	1995 - 1999 (5)
	2000 - 2004 (1)
	2005 - 2009 (46)
	2010 - 2014 (53)
	2015 - 2019 (42)
	2020 - 2024 (24)
	2025 - 2029 (1)

Enzyme Classification Name

Transferases (172)

Symmetry Type

	Cyclic (167)
	Asymmetric (10)
	Dihedral (2)
	Helical (1)

SCOP Classification

	All alpha proteins (116)
	Artifacts (13)
	Alpha and beta proteins (a+b) (1)

AllSelected

1 to 25 of 172 Structures

Page 1 of 7

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1FPS \| pdb_00001fps	Download File View File

CRYSTAL STRUCTURE OF RECOMBINANT FARNESYL DIPHOSPHATE SYNTHASE AT 2.6 ANGSTROMS RESOLUTION

Tarshis, L.C., Yan, M., Poulter, C.D., Sacchettini, J.C.

(1994) Biochemistry 33: 10871-10877

Released	1995-07-10
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Gallus gallus
Macromolecule	FARNESYL DIPHOSPHATE SYNTHASE (protein)

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1R9C \| pdb_00001r9c	Download File View File

Crystal Structure of Fosfomycin Resistance Protein FosX from Mesorhizobium Loti

Fillgrove, K.L., Pakhomova, S., Newcomer, M.E., Armstrong, R.N.

(2003) J Am Chem Soc 125: 15730-15731

Released	2004-02-10
Method	X-RAY DIFFRACTION 1.83 Å
Organisms	Mesorhizobium loti
Macromolecule	glutathione transferase (protein)
Unique Ligands	MN

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1UBV \| pdb_00001ubv	Download File View File

STRUCTURE OF FARNESYL PYROPHOSPHATE SYNTHETASE

Tarshis, L.C., Proteau, P., Poulter, C.D., Sacchettini, J.C.

(1996) Proc Natl Acad Sci U S A 93: 15018-15023

Released	1997-03-12
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Gallus gallus
Macromolecule	FARNESYL DIPHOSPHATE SYNTHASE (protein)

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1UBW \| pdb_00001ubw	Download File View File

STRUCTURE OF FARNESYL PYROPHOSPHATE SYNTHETASE

Tarshis, L.C., Proteau, P., Poulter, C.D., Sacchettini, J.C.

(1996) Proc Natl Acad Sci U S A 93: 15018-15023

Released	1997-03-12
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Gallus gallus
Macromolecule	FARNESYL DIPHOSPHATE SYNTHASE (protein)
Unique Ligands	GPP, MG

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1UBX \| pdb_00001ubx	Download File View File

STRUCTURE OF FARNESYL PYROPHOSPHATE SYNTHETASE

Tarshis, L.C., Proteau, P., Poulter, C.D., Sacchettini, J.C.

(1996) Proc Natl Acad Sci U S A 93: 15018-15023

Released	1997-03-12
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Gallus gallus
Macromolecule	FARNESYL DIPHOSPHATE SYNTHASE (protein)
Unique Ligands	FPP, MG

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1UBY \| pdb_00001uby	Download File View File

STRUCTURE OF FARNESYL PYROPHOSPHATE SYNTHETASE

Tarshis, L.C., Proteau, P., Poulter, C.D., Sacchettini, J.C.

(1996) Proc Natl Acad Sci U S A 93: 15018-15023

Released	1997-03-12
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Gallus gallus
Macromolecule	FARNESYL DIPHOSPHATE SYNTHASE (protein)
Unique Ligands	DMA, MG

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1YQ7 \| pdb_00001yq7	Download File View File

Human farnesyl diphosphate synthase complexed with risedronate

Kavanagh, K.L., Guo, K., Von delft, F., Arrowsmith, C., Sundstrom, M., Edwards, A., Oppermann, U., Structural Genomics Consortium (SGC)

To be published

Released	2005-02-22
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	Farnesyl pyrophosphate synthetase (protein)
Unique Ligands	MG, PO4, RIS

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1YV5 \| pdb_00001yv5	Download File View File

Human farnesyl diphosphate synthase complexed with Mg and risedronate

Kavanagh, K.L., Guo, K., Von Delft, F., Arrowsmith, C., Sundstrom, M., Edwards, A., Oppermann, U., Structural Genomics Consortium (SGC)

(2006) Proc Natl Acad Sci U S A 103: 7829-7834

Released	2005-03-01
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Farnesyl pyrophosphate synthetase (protein)
Unique Ligands	MG, PO4, RIS

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1ZW5 \| pdb_00001zw5	Download File View File

X-ray structure of Farnesyl diphosphate synthase protein

Kavanagh, K.L., Guo, K., Wu, X., von Delft, F., Arrowsmith, C., Sundstrom, M., Edwards, A., Oppermann, U., Structural Genomics Consortium (SGC)

(2006) Proc Natl Acad Sci U S A 103: 7829-7834

Released	2005-06-28
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	farnesyl diphosphate synthase (protein)
Unique Ligands	IPE, MG, ZOL

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2AZJ \| pdb_00002azj	Download File View File

Crystal structure for the mutant D81C of Sulfolobus solfataricus hexaprenyl pyrophosphate synthase

Sun, H.Y., Ko, T.P., Kuo, C.J., Guo, R.T., Chou, C.C., Liang, P.H., Wang, A.H.J.

(2005) J Bacteriol 187: 8137-8148

Released	2006-03-14
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Saccharolobus solfataricus
Macromolecule	Geranylgeranyl pyrophosphate synthetase (protein)

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2AZK \| pdb_00002azk	Download File View File

Crystal structure for the mutant W136E of Sulfolobus solfataricus hexaprenyl pyrophosphate synthase

Sun, H.Y., Ko, T.P., Kuo, C.J., Guo, R.T., Chou, C.C., Liang, P.H., Wang, A.H.J.

(2005) J Bacteriol 187: 8137-8148

Released	2006-03-14
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Saccharolobus solfataricus
Macromolecule	Geranylgeranyl pyrophosphate synthetase (protein)

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2DH4 \| pdb_00002dh4	Download File View File

Geranylgeranyl pyrophosphate synthase

Chang, T.-H., Guo, R.-T., Ko, T.-P., Wang, A.H., Liang, P.-H.

(2006) J Biological Chem 281: 14991-15000

Released	2006-04-04
Method	X-RAY DIFFRACTION 1.98 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	YPL069C (protein)
Unique Ligands	MG

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2E8T \| pdb_00002e8t	Download File View File

S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium, FsPP and IPP

Guo, R.T., Ko, T.P., Chen, C.K.-M., Jeng, W.Y., Chang, T.H., Liang, P.H., Oldfield, E., Wang, A.H.-J.

(2007) Proc Natl Acad Sci U S A 104: 10022-10027

Released	2007-06-12
Method	X-RAY DIFFRACTION 2.13 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Geranylgeranyl pyrophosphate synthetase (protein)
Unique Ligands	FPS, IPE, MG

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2E8U \| pdb_00002e8u	Download File View File

S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium and IPP (P21)

Guo, R.T., Chen, C.K.-M., Ko, T.P., Jeng, W.Y., Chang, T.H., Liang, P.H., Oldfield, E., Wang, A.H.-J.

(2007) Proc Natl Acad Sci U S A 104: 10022-10027

Released	2007-06-12
Method	X-RAY DIFFRACTION 2.08 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Geranylgeranyl pyrophosphate synthetase (protein)
Unique Ligands	IPE, MG

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2E8V \| pdb_00002e8v	Download File View File

S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with product GGPP (P21)

Chen, C.K.-M., Guo, R.T., Ko, T.P., Jeng, W.Y., Chang, T.H., Liang, P.H., Oldfield, E., Wang, A.H.-J.

(2007) Proc Natl Acad Sci U S A 104: 10022-10027

Released	2007-06-12
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Geranylgeranyl pyrophosphate synthetase (protein)
Unique Ligands	GRG

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2E8W \| pdb_00002e8w	Download File View File

S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium and IPP

Guo, R.T., Ko, T.P., Chen, C.K.-M., Jeng, W.Y., Chang, T.H., Liang, P.H., Oldfield, E., Wang, A.H.-J.

(2007) Proc Natl Acad Sci U S A 104: 10022-10027

Released	2007-06-12
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Geranylgeranyl pyrophosphate synthetase (protein)
Unique Ligands	IPE, MG

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2E8X \| pdb_00002e8x	Download File View File

S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium and GPP

Guo, R.T., Ko, T.P., Chen, C.K.-M., Jeng, W.Y., Chang, T.H., Liang, P.H., Oldfield, E., Wang, A.H.-J.

(2007) Proc Natl Acad Sci U S A 104: 10022-10027

Released	2007-06-12
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Geranylgeranyl pyrophosphate synthetase (protein)
Unique Ligands	GPP, MG

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2E90 \| pdb_00002e90	Download File View File

S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium, pyrophosphate and FPP

Guo, R.T., Ko, T.P., Chen, C.K.-M., Jeng, W.Y., Chang, T.H., Liang, P.H., Oldfield, E., Wang, A.H.-J.

(2007) Proc Natl Acad Sci U S A 104: 10022-10027

Released	2007-06-12
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Geranylgeranyl pyrophosphate synthetase (protein)
Unique Ligands	FPP, MG, PPV

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2E91 \| pdb_00002e91	Download File View File

S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium and BPH-91

Guo, R.T., Ko, T.P., Cao, R., Chen, C.K.-M., Jeng, W.Y., Chang, T.H., Liang, P.H., Oldfield, E., Wang, A.H.-J.

(2007) Proc Natl Acad Sci U S A 104: 10022-10027

Released	2007-06-12
Method	X-RAY DIFFRACTION 2.14 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Geranylgeranyl pyrophosphate synthetase (protein)
Unique Ligands	MG, ZOL

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2E92 \| pdb_00002e92	Download File View File

S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium and BPH-261

Guo, R.T., Ko, T.P., Cao, R., Jeng, W.Y., Chen, C.K.-M., Chang, T.H., Liang, P.H., Oldfield, E., Wang, A.H.-J.

(2007) Proc Natl Acad Sci U S A 104: 10022-10027

Released	2007-06-12
Method	X-RAY DIFFRACTION 2.31 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Geranylgeranyl pyrophosphate synthetase (protein)
Unique Ligands	M0N, MG

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2E93 \| pdb_00002e93	Download File View File

S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with BPH-629

Guo, R.T., Cao, R., Ko, T.P., Chen, C.K.-M., Jeng, W.Y., Chang, T.H., Liang, P.H., Oldfield, E., Wang, A.H.-J.

(2007) Proc Natl Acad Sci U S A 104: 10022-10027

Released	2007-06-12
Method	X-RAY DIFFRACTION 2.12 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Geranylgeranyl pyrophosphate synthetase (protein)
Unique Ligands	B29

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2E94 \| pdb_00002e94	Download File View File

S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium and BPH-364

Guo, R.T., Ko, T.P., Cao, R., Chen, C.K.-M., Jeng, W.Y., Chang, T.H., Liang, P.H., Oldfield, E., Wang, A.H.-J.

(2007) Proc Natl Acad Sci U S A 104: 10022-10027

Released	2007-06-12
Method	X-RAY DIFFRACTION 2.18 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Geranylgeranyl pyrophosphate synthetase (protein)
Unique Ligands	364, MG

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2E95 \| pdb_00002e95	Download File View File

S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium and BPH-675

Guo, R.T., Cao, R., Ko, T.P., Jeng, W.Y., Chang, T.H., Chen, C.K.-M., Liang, P.H., Oldfield, E., Wang, A.H.-J.

(2007) Proc Natl Acad Sci U S A 104: 10022-10027

Released	2007-06-12
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Geranylgeranyl pyrophosphate synthetase (protein)
Unique Ligands	B75, MG