RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: PubMed ID = 12937174

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 10 Structures.

Refinements

Structure Determination Methodology

experimental (10)

Scientific Name of Source Organism

	Escherichia coli O157:H7 (9)
	Escherichia coli (1)

Taxonomy

Bacteria (10)

Experimental Method

X-RAY DIFFRACTION (10)

Polymer Entity Type

Protein (10)

Refinement Resolution (Å)

	1.5 - 2.0 (1)
	2.0 - 2.5 (7)
	2.5 - 3.0 (2)

Release Date

2000 - 2004 (10)

Enzyme Classification Name

Transferases (10)

Symmetry Type

Dihedral (10)

SCOP Classification

Alpha and beta proteins (a/b) (10)

AllSelected

1 to 10 of 10 Structures

Page 1 of 1

Sort by

Explore in 3D

1PK7 \| pdb_00001pk7	Download File View File

Crystal Structure of E. coli purine nucleoside phosphorylase complexed with adenosine and sulfate/phosphate

Bennett, E.M., Li, C., Allan, P.W., Parker, W.B., Ealick, S.E.

(2003) J Biological Chem 278: 47110-47118

Released	2003-11-25
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli O157:H7
Macromolecule	Purine nucleoside phosphorylase DeoD-type (protein)
Unique Ligands	ADN, PO4

Explore in 3D

1PK9 \| pdb_00001pk9	Download File View File

Crystal Structure of E. coli purine nucleoside phosphorylase complexed with 2-fluoroadenosine and sulfate/phosphate

Bennett, E.M., Li, C., Allan, P.W., Parker, W.B., Ealick, S.E.

(2003) J Biological Chem 278: 47110-47118

Released	2003-11-25
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Escherichia coli O157:H7
Macromolecule	Purine nucleoside phosphorylase DeoD-type (protein)
Unique Ligands	2FA, PO4

Explore in 3D

1PKE \| pdb_00001pke	Download File View File

Crystal Structure of E. coli purine nucleoside phosphorylase complexed with 2-fluoro-2'-deoxyadenosine and sulfate/phosphate

Bennett, E.M., Li, C., Allan, P.W., Parker, W.B., Ealick, S.E.

(2003) J Biological Chem 278: 47110-47118

Released	2003-11-25
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli O157:H7
Macromolecule	Purine nucleoside phosphorylase DeoD-type (protein)
Unique Ligands	2FD, PO4

Explore in 3D

1PR0 \| pdb_00001pr0	Download File View File

Escherichia coli Purine Nucleoside Phosphorylase Complexed with Inosine and Phosphate/Sulfate

Bennett, E.M., Li, C., Allan, P.W., Parker, W.B., Ealick, S.E.

(2003) J Biological Chem 278: 47110-47118

Released	2003-11-25
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli O157:H7
Macromolecule	Purine nucleoside phosphorylase DeoD-type (protein)
Unique Ligands	NOS, PO4

Explore in 3D

1PR1 \| pdb_00001pr1	Download File View File

Escherichia coli Purine Nucleoside Phosphorylase Complexed with Formycin B and Phosphate/Sulfate

Bennett, E.M., Li, C., Allan, P.W., Parker, W.B., Ealick, S.E.

(2003) J Biological Chem 278: 47110-47118

Released	2003-11-25
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli
Macromolecule	Purine nucleoside phosphorylase (protein)
Unique Ligands	FMB, PO4

Explore in 3D

1PR2 \| pdb_00001pr2	Download File View File

Escherichia coli Purine Nucleoside Phosphorylase Complexed with 9-beta-D-[2-deoxyribofuranosyl]-6-methylpurine and Phosphate/Sulfate

Bennett, E.M., Li, C., Allan, P.W., Parker, W.B., Ealick, S.E.

(2003) J Biological Chem 278: 47110-47118

Released	2003-11-25
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli O157:H7
Macromolecule	Purine nucleoside phosphorylase DeoD-type (protein)
Unique Ligands	MDR, PO4

Explore in 3D

1PR4 \| pdb_00001pr4	Download File View File

Escherichia coli Purine Nucleoside Phosphorylase Complexed with 9-beta-D-ribofuranosyl-6-methylthiopurine and Phosphate/Sulfate

Bennett, E.M., Li, C., Allan, P.W., Parker, W.B., Ealick, S.E.

(2003) J Biological Chem 278: 47110-47118

Released	2003-11-25
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Escherichia coli O157:H7
Macromolecule	Purine nucleoside phosphorylase DeoD-type (protein)
Unique Ligands	MTP, PO4

Explore in 3D

1PR5 \| pdb_00001pr5	Download File View File

Escherichia coli Purine Nucleoside Phosphorylase Complexed with 7-deazaadenosine and Phosphate/Sulfate

Bennett, E.M., Li, C., Allan, P.W., Parker, W.B., Ealick, S.E.

(2003) J Biological Chem 278: 47110-47118

Released	2003-11-25
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli O157:H7
Macromolecule	Purine nucleoside phosphorylase DeoD-type (protein)
Unique Ligands	PO4, TBN

Explore in 3D

1PR6 \| pdb_00001pr6	Download File View File

Escherichia coli Purine Nucleoside Phosphorylase Complexed with 9-beta-D-xylofuranosyladenine and Phosphate/Sulfate

Bennett, E.M., Li, C., Allan, P.W., Parker, W.B., Ealick, S.E.

(2003) J Biological Chem 278: 47110-47118

Released	2003-11-25
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Escherichia coli O157:H7
Macromolecule	Purine nucleoside phosphorylase DeoD-type (protein)
Unique Ligands	PO4, XYA

Explore in 3D

1PW7 \| pdb_00001pw7	Download File View File

Crystal Structure of E. coli purine nucleoside phosphorylase complexed with 9-beta-D-arabinofuranosyladenine and sulfate/phosphate

Bennett, E.M., Li, C., Allan, P.W., Parker, W.B., Ealick, S.E.

(2003) J Biological Chem 278: 47110-47118

Released	2003-11-25
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli O157:H7
Macromolecule	Purine nucleoside phosphorylase DeoD-type (protein)
Unique Ligands	PO4, RAB

1 to 10 of 10 Structures

Page 1 of 1

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1PK7 | pdb_00001pk7

Crystal Structure of E. coli purine nucleoside phosphorylase complexed with adenosine and sulfate/phosphate

1PK9 | pdb_00001pk9

Crystal Structure of E. coli purine nucleoside phosphorylase complexed with 2-fluoroadenosine and sulfate/phosphate

1PKE | pdb_00001pke

Crystal Structure of E. coli purine nucleoside phosphorylase complexed with 2-fluoro-2'-deoxyadenosine and sulfate/phosphate

1PR0 | pdb_00001pr0

Escherichia coli Purine Nucleoside Phosphorylase Complexed with Inosine and Phosphate/Sulfate

1PR1 | pdb_00001pr1

Escherichia coli Purine Nucleoside Phosphorylase Complexed with Formycin B and Phosphate/Sulfate

1PR2 | pdb_00001pr2

Escherichia coli Purine Nucleoside Phosphorylase Complexed with 9-beta-D-[2-deoxyribofuranosyl]-6-methylpurine and Phosphate/Sulfate

1PR4 | pdb_00001pr4

Escherichia coli Purine Nucleoside Phosphorylase Complexed with 9-beta-D-ribofuranosyl-6-methylthiopurine and Phosphate/Sulfate

1PR5 | pdb_00001pr5

Escherichia coli Purine Nucleoside Phosphorylase Complexed with 7-deazaadenosine and Phosphate/Sulfate

1PR6 | pdb_00001pr6

Escherichia coli Purine Nucleoside Phosphorylase Complexed with 9-beta-D-xylofuranosyladenine and Phosphate/Sulfate

1PW7 | pdb_00001pw7

Crystal Structure of E. coli purine nucleoside phosphorylase complexed with 9-beta-D-arabinofuranosyladenine and sulfate/phosphate

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1PK7 | pdb_00001pk7

1PK9 | pdb_00001pk9

1PKE | pdb_00001pke

1PR0 | pdb_00001pr0

1PR1 | pdb_00001pr1

1PR2 | pdb_00001pr2

1PR4 | pdb_00001pr4

1PR5 | pdb_00001pr5

1PR6 | pdb_00001pr6

1PW7 | pdb_00001pw7