6Z6M

Cryo-EM structure of human 80S ribosomes bound to EBP1, eEF2 and SERBP1


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Starting Model: experimental
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wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Structure and function of yeast Lso2 and human CCDC124 bound to hibernating ribosomes.

Wells, J.N.Buschauer, R.Mackens-Kiani, T.Best, K.Kratzat, H.Berninghausen, O.Becker, T.Gilbert, W.Cheng, J.Beckmann, R.

(2020) PLoS Biol 18: e3000780-e3000780

  • DOI: https://doi.org/10.1371/journal.pbio.3000780
  • Primary Citation of Related Structures:  
    6Z6J, 6Z6K, 6Z6L, 6Z6M, 6Z6N

  • PubMed Abstract: 

    Cells adjust to nutrient deprivation by reversible translational shutdown. This is accompanied by maintaining inactive ribosomes in a hibernation state, in which they are bound by proteins with inhibitory and protective functions. In eukaryotes, such a function was attributed to suppressor of target of Myb protein 1 (Stm1; SERPINE1 mRNA-binding protein 1 [SERBP1] in mammals), and recently, late-annotated short open reading frame 2 (Lso2; coiled-coil domain containing short open reading frame 124 [CCDC124] in mammals) was found to be involved in translational recovery after starvation from stationary phase. Here, we present cryo-electron microscopy (cryo-EM) structures of translationally inactive yeast and human ribosomes. We found Lso2/CCDC124 accumulating on idle ribosomes in the nonrotated state, in contrast to Stm1/SERBP1-bound ribosomes, which display a rotated state. Lso2/CCDC124 bridges the decoding sites of the small with the GTPase activating center (GAC) of the large subunit. This position allows accommodation of the duplication of multilocus region 34 protein (Dom34)-dependent ribosome recycling system, which splits Lso2-containing, but not Stm1-containing, ribosomes. We propose a model in which Lso2 facilitates rapid translation reactivation by stabilizing the recycling-competent state of inactive ribosomes.


  • Organizational Affiliation

    Gene Center and Center for Integrated Protein Science Munich, Department of Biochemistry, University of Munich, Munich, Germany.


Macromolecules

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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L8D [auth LA]257Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000161016 
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L3E [auth LB]403Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000100316 
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L4F [auth LC]427Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000174444 
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L5G [auth LD]297Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000122406 
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L6H [auth LE]288Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000089009 
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Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L7I [auth LF]248Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000147604 
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Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L7aJ [auth LG]266Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000148303 
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Entity ID: 11
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L9K [auth LH]192Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000163682 
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Entity ID: 12
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L10-likeL [auth LI]214Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000165496 
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Entity ID: 13
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L11M [auth LJ]178Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000142676 
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Entity ID: 14
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L13N [auth LL]211Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000167526 
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Entity ID: 15
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L14O [auth LM]215Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000188846 
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Entity ID: 16
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L15P [auth LN]204Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000174748 
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Entity ID: 17
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L13aQ [auth LO]203Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000142541 
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Entity ID: 18
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L17R [auth LP]184Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000265681 
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Entity ID: 19
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L18S [auth LQ]188Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000063177 
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Entity ID: 20
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L19T [auth LR]196Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000108298 
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Entity ID: 21
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L18aU [auth LS]176Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000105640 
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Entity ID: 22
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L21V [auth LT]160Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000122026 
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Entity ID: 23
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L22W [auth LU]128Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000116251 
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Entity ID: 24
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L23X [auth LV]140Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000125691 
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Entity ID: 25
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L24Y [auth LW]157Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000114391 
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Entity ID: 26
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L23aZ [auth LX]156Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000198242 
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Entity ID: 27
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L26AA [auth LY]145Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000161970 
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Entity ID: 28
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L27BA [auth LZ]136Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000131469 
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Entity ID: 29
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L27aCA [auth La]148Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000166441 
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Entity ID: 30
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L29DA [auth Lb]159Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000162244 
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Entity ID: 31
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L30EA [auth Lc]115Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000156482 
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Entity ID: 32
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L31FA [auth Ld]125Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000071082 
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Entity ID: 33
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L32GA [auth Le]135Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000144713 
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Entity ID: 34
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L35aHA [auth Lf]110Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000182899 
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Entity ID: 35
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L34IA [auth Lg]117Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000109475 
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Entity ID: 36
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L35JA [auth Lh]123Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000136942 
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Entity ID: 37
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L36KA [auth Li]105Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000130255 
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Entity ID: 38
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L37LA [auth Lj]97Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000145592 
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Entity ID: 39
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L38MA [auth Lk]70Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000172809 
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Entity ID: 40
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L39NA [auth Ll]51Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000198918 
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Entity ID: 41
MoleculeChains Sequence LengthOrganismDetailsImage
Ubiquitin-60S ribosomal protein L40OA [auth Lm]128Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000221983 
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Entity ID: 42
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L41PA [auth Ln]25Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000229117 
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Entity ID: 43
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L36aQA [auth Lo]106Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000241343 
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Entity ID: 44
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L37aRA [auth Lp]92Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000197756 
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Entity ID: 45
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L28SA [auth Lr]137Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000108107 
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Entity ID: 46
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L10aTA [auth Lz]217Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000198755 
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Entity ID: 48
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein SAVA [auth SA]295Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000168028 
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Entity ID: 49
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S3aWA [auth SB]264Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000145425 
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Entity ID: 50
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S3XA [auth SD]243Homo sapiensMutation(s): 0 
EC: 4.2.99.18
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GTEx:  ENSG00000149273 
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Entity ID: 51
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S4, X isoformYA [auth SE]263Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000198034 
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Entity ID: 52
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S5ZA [auth SF]204Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000083845 
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Entity ID: 53
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S7AB [auth SH]194Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000171863 
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Entity ID: 54
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S8BB [auth SI]208Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000142937 
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Entity ID: 55
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S10CB [auth SK]165Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000124614 
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Entity ID: 56
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S11DB [auth SL]158Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000142534 
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Entity ID: 57
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S15EB [auth SP]145Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000115268 
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Entity ID: 58
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S16FB [auth SQ]146Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000105193 
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Entity ID: 59
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S17GB [auth SR]135Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000182774 
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Entity ID: 60
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S18HB [auth SS]152Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000231500 
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Entity ID: 61
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S19IB [auth ST]145Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000105372 
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Entity ID: 62
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S20JB [auth SU]119Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000008988 
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Entity ID: 63
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S21KB [auth SV]83Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000171858 
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Entity ID: 64
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S23LB [auth SX]143Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000186468 
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Entity ID: 65
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S26MB [auth Sa]115Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000197728 
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Entity ID: 66
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S28NB [auth Sc]69Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000233927 
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Entity ID: 67
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S29OB [auth Sd]56Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000213741 
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Entity ID: 68
MoleculeChains Sequence LengthOrganismDetailsImage
Receptor of activated protein C kinase 1PB [auth Sg]317Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000204628 
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Entity ID: 69
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S2QB [auth SC]293Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000140988 
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Entity ID: 70
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S6RB [auth SG]249Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000137154 
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Entity ID: 71
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S9SB [auth SJ]194Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000170889 
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Entity ID: 72
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S12TB [auth SM]132Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000112306 
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Entity ID: 73
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S13UB [auth SN]151Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000110700 
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Entity ID: 74
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S14VB [auth SO]151Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000164587 
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Entity ID: 75
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S15aWB [auth SW]130Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000134419 
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Entity ID: 76
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S24XB [auth SY]133Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000138326 
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Entity ID: 77
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S25YB [auth SZ]125Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000118181 
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Entity ID: 78
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S27ZB [auth Sb]84Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000177954 
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Entity ID: 79
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S30AC [auth Se]59Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000149806 
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Entity ID: 80
MoleculeChains Sequence LengthOrganismDetailsImage
Ubiquitin-40S ribosomal protein S27aBC [auth Sf]156Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000143947 
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Entity ID: 81
MoleculeChains Sequence LengthOrganismDetailsImage
Proliferation-associated protein 2G4CC [auth CA]394Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000170515 
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Entity ID: 82
MoleculeChains Sequence LengthOrganismDetailsImage
Elongation factor 2DC [auth CB]858Homo sapiensMutation(s): 0 
EC: 3.6.5
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GTEx:  ENSG00000167658 
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Entity ID: 84
MoleculeChains Sequence LengthOrganismDetailsImage
Plasminogen activator inhibitor 1 RNA-binding proteinFC [auth CD]408Homo sapiensMutation(s): 0 
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GTEx:  ENSG00000142864 
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Entity ID: 1
MoleculeChains LengthOrganismImage
28S rRNAA [auth L5]5,070Homo sapiens
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Entity ID: 2
MoleculeChains LengthOrganismImage
5S rRNAB [auth L7]121Homo sapiens
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Entity ID: 3
MoleculeChains LengthOrganismImage
5.8S rRNAC [auth L8]157Homo sapiens
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Entity ID: 47
MoleculeChains LengthOrganismImage
18S rRNAUA [auth S2]1,869Homo sapiens
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Entity ID: 83
MoleculeChains LengthOrganismImage
tRNAEC [auth CC]85Homo sapiens
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Small Molecules
Ligands 2 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download Ideal Coordinates CCD File 
AL [auth Lm]
BL [auth Lo]
CL [auth Lp]
GM [auth Sa]
HM [auth Sd]
AL [auth Lm],
BL [auth Lo],
CL [auth Lp],
GM [auth Sa],
HM [auth Sd],
IM [auth SM],
YK [auth Lg],
ZK [auth Lj]
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
MG
Query on MG

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AD [auth L5]
AE [auth L5]
AF [auth L5]
AG [auth L5]
AH [auth L5]
AD [auth L5],
AE [auth L5],
AF [auth L5],
AG [auth L5],
AH [auth L5],
AI [auth L5],
AJ [auth L5],
AK [auth L5],
AM [auth S2],
BD [auth L5],
BE [auth L5],
BF [auth L5],
BG [auth L5],
BH [auth L5],
BI [auth L5],
BJ [auth L5],
BK [auth L5],
BM [auth S2],
CD [auth L5],
CE [auth L5],
CF [auth L5],
CG [auth L5],
CH [auth L5],
CI [auth L5],
CJ [auth L5],
CK [auth L5],
CM [auth S2],
DD [auth L5],
DE [auth L5],
DF [auth L5],
DG [auth L5],
DH [auth L5],
DI [auth L5],
DJ [auth L5],
DK [auth L5],
DL [auth S2],
DM [auth S2],
ED [auth L5],
EE [auth L5],
EF [auth L5],
EG [auth L5],
EH [auth L5],
EI [auth L5],
EJ [auth L5],
EK [auth L5],
EL [auth S2],
EM [auth S2],
FD [auth L5],
FE [auth L5],
FF [auth L5],
FG [auth L5],
FH [auth L5],
FI [auth L5],
FJ [auth L5],
FK [auth L5],
FL [auth S2],
FM [auth S2],
GC [auth L5],
GD [auth L5],
GE [auth L5],
GF [auth L5],
GG [auth L5],
GH [auth L5],
GI [auth L5],
GJ [auth L5],
GK [auth L5],
GL [auth S2],
HC [auth L5],
HD [auth L5],
HE [auth L5],
HF [auth L5],
HG [auth L5],
HH [auth L5],
HI [auth L5],
HJ [auth L5],
HK [auth L5],
HL [auth S2],
IC [auth L5],
ID [auth L5],
IE [auth L5],
IF [auth L5],
IG [auth L5],
IH [auth L5],
II [auth L5],
IJ [auth L5],
IK [auth L5],
IL [auth S2],
JC [auth L5],
JD [auth L5],
JE [auth L5],
JF [auth L5],
JG [auth L5],
JH [auth L5],
JI [auth L5],
JJ [auth L5],
JK [auth L7],
JL [auth S2],
JM [auth CC],
KC [auth L5],
KD [auth L5],
KE [auth L5],
KF [auth L5],
KG [auth L5],
KH [auth L5],
KI [auth L5],
KJ [auth L5],
KK [auth L7],
KL [auth S2],
LC [auth L5],
LD [auth L5],
LE [auth L5],
LF [auth L5],
LG [auth L5],
LH [auth L5],
LI [auth L5],
LJ [auth L5],
LK [auth L7],
LL [auth S2],
MC [auth L5],
MD [auth L5],
ME [auth L5],
MF [auth L5],
MG [auth L5],
MH [auth L5],
MI [auth L5],
MJ [auth L5],
MK [auth L8],
ML [auth S2],
NC [auth L5],
ND [auth L5],
NE [auth L5],
NF [auth L5],
NG [auth L5],
NH [auth L5],
NI [auth L5],
NJ [auth L5],
NK [auth L8],
NL [auth S2],
OC [auth L5],
OD [auth L5],
OE [auth L5],
OF [auth L5],
OG [auth L5],
OH [auth L5],
OI [auth L5],
OJ [auth L5],
OK [auth L8],
OL [auth S2],
PC [auth L5],
PD [auth L5],
PE [auth L5],
PF [auth L5],
PG [auth L5],
PH [auth L5],
PI [auth L5],
PJ [auth L5],
PK [auth L8],
PL [auth S2],
QC [auth L5],
QD [auth L5],
QE [auth L5],
QF [auth L5],
QG [auth L5],
QH [auth L5],
QI [auth L5],
QJ [auth L5],
QK [auth L8],
QL [auth S2],
RC [auth L5],
RD [auth L5],
RE [auth L5],
RF [auth L5],
RG [auth L5],
RH [auth L5],
RI [auth L5],
RJ [auth L5],
RK [auth LA],
RL [auth S2],
SC [auth L5],
SD [auth L5],
SE [auth L5],
SF [auth L5],
SG [auth L5],
SH [auth L5],
SI [auth L5],
SJ [auth L5],
SK [auth LI],
SL [auth S2],
TC [auth L5],
TD [auth L5],
TE [auth L5],
TF [auth L5],
TG [auth L5],
TH [auth L5],
TI [auth L5],
TJ [auth L5],
TK [auth LP],
TL [auth S2],
UC [auth L5],
UD [auth L5],
UE [auth L5],
UF [auth L5],
UG [auth L5],
UH [auth L5],
UI [auth L5],
UJ [auth L5],
UK [auth LT],
UL [auth S2],
VC [auth L5],
VD [auth L5],
VE [auth L5],
VF [auth L5],
VG [auth L5],
VH [auth L5],
VI [auth L5],
VJ [auth L5],
VK [auth LV],
VL [auth S2],
WC [auth L5],
WD [auth L5],
WE [auth L5],
WF [auth L5],
WG [auth L5],
WH [auth L5],
WI [auth L5],
WJ [auth L5],
WK [auth Le],
WL [auth S2],
XC [auth L5],
XD [auth L5],
XE [auth L5],
XF [auth L5],
XG [auth L5],
XH [auth L5],
XI [auth L5],
XJ [auth L5],
XK [auth Lg],
XL [auth S2],
YC [auth L5],
YD [auth L5],
YE [auth L5],
YF [auth L5],
YG [auth L5],
YH [auth L5],
YI [auth L5],
YJ [auth L5],
YL [auth S2],
ZC [auth L5],
ZD [auth L5],
ZE [auth L5],
ZF [auth L5],
ZG [auth L5],
ZH [auth L5],
ZI [auth L5],
ZJ [auth L5],
ZL [auth S2]
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.10 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX
RECONSTRUCTIONRELION

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2020-07-29
    Type: Initial release
  • Version 1.1: 2024-05-22
    Changes: Data collection, Database references, Refinement description