De novo backbone design for monomerization of near-infrared fluorescent protein
Hu, X., Xu, Y.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
near-infrared fluorescent protein | 214 | synthetic construct | Mutation(s): 0  | ||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
9UY (Subject of Investigation/LOI) Query on 9UY | H [auth A] | 3-[5-[[(3~{R},4~{R})-3-ethenyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-2-[[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid C33 H38 N4 O6 IAVYOZQSRLDKLE-WOJBJXKFSA-N | |||
GOL Query on GOL | E [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
FMT Query on FMT | D [auth A], F [auth A], G [auth A] | FORMIC ACID C H2 O2 BDAGIHXWWSANSR-UHFFFAOYSA-N | |||
NA Query on NA | B [auth A], C [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 105.987 | α = 90 |
b = 105.987 | β = 90 |
c = 41.691 | γ = 120 |
Software Name | Purpose |
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XDS | data reduction |
PHENIX | refinement |
Aimless | data scaling |
MOLREP | phasing |
Funding Organization | Location | Grant Number |
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Not funded | -- |