Download MendeleyCrystal structure of Procerain from Calotropis gigantea
Kumar, A., Jamdar, S.N., Srivastava, G., Makde, R.D.To be published.
8JCR
Crystal structure of Procerain from Calotropis gigantea (pH 6.0)
- PDB DOI: https://doi.org/10.2210/pdb8JCR/pdb
- Classification: HYDROLASE
- Organism(s): Calotropis gigantea
- Mutation(s): No
- Deposited: 2023-05-11 Released: 2024-05-22
- Funding Organization(s): Other government
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.40 Å
- R-Value Free: 0.174
- R-Value Work: 0.159
- R-Value Observed: 0.160
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Procerain | 214 | Calotropis gigantea | Mutation(s): 0 |  | |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| E64 (Subject of Investigation/LOI) Query on E64 | D [auth A] | N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE C15 H30 N5 O5 QPQNJAXBPHVASB-QWRGUYRKSA-O |  | ||
| GOL Query on GOL | C [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| BME Query on BME | B [auth A] | BETA-MERCAPTOETHANOL C2 H6 O S DGVVWUTYPXICAM-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.40 Å
- R-Value Free: 0.174
- R-Value Work: 0.159
- R-Value Observed: 0.160
- Space Group: C 2 2 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 68.675 | α = 90 |
| b = 120.98 | β = 90 |
| c = 61.024 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| XDS | data reduction |
| Aimless | data scaling |
| PHENIX | phasing |
| PHENIX | model building |
| Coot | model building |
Entry History & Funding Information
Deposition Data
- Released Date: 2024-05-22 Deposition Author(s): Kumar, A., Jamdar, S.N., Srivastava, G., Makde, R.D.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Other government | India | -- |
Revision History (Full details and data files)
- Version 1.0: 2024-05-22
Type: Initial release
