Download MendeleyCrystal structure of human CLK3 bound to RN129
Kraemer, A., Raig, N., Knapp, S.To be published.
9EZ3
Crystal structure of human CLK3 bound to RN129
- PDB DOI: https://doi.org/10.2210/pdb9EZ3/pdb
- Classification: TRANSFERASE
- Organism(s): Homo sapiens
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2024-04-10 Released: 2024-09-11
- Funding Organization(s): Innovative Medicines Initiative
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.70 Å
- R-Value Free: 0.268
- R-Value Work: 0.203
- R-Value Observed: 0.206
This is version 1.0 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Dual specificity protein kinase CLK3 | 360 | Homo sapiens | Mutation(s): 0 Gene Names: CLK3 EC: 2.7.12.1 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P49761 (Homo sapiens) Explore P49761 Go to UniProtKB: P49761 | |||||
PHAROS: P49761 GTEx: ENSG00000179335 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P49761 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| A1H74 (Subject of Investigation/LOI) Query on A1H74 | C [auth A] | 1-(5-~{tert}-butyl-2-quinolin-6-yl-pyrazol-3-yl)-3-[3-(4-morpholin-4-yl-7~{H}-pyrrolo[2,3-d]pyrimidin-5-yl)phenyl]urea C33 H33 N9 O2 VZYRIZGYTGKYQV-UHFFFAOYSA-N |  | ||
| SO4 Query on SO4 | B [auth A], D [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.70 Å
- R-Value Free: 0.268
- R-Value Work: 0.203
- R-Value Observed: 0.206
- Space Group: P 41
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 74.587 | α = 90 |
| b = 74.587 | β = 90 |
| c = 97.035 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| Aimless | data scaling |
| XDS | data reduction |
| MOLREP | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2024-09-11 Deposition Author(s): Kraemer, A., Raig, N., Knapp, S.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Innovative Medicines Initiative | Switzerland | 875510 |
Revision History (Full details and data files)
- Version 1.0: 2024-09-11
Type: Initial release
