Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyCaliciviridae-like VP S domain 8021578 4003470 SCOP2 (2022-06-29)
ASCOP2 FamilyNorovirus capsid protein P (P1-P2) domain-like 8093127 4007794 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyPositive stranded ssRNA viruses-like 8033958 3000918 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyAstrovirus capsid protein, P1 domain-like 8093126 3002535 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyNorovirus P2 domain-like 8093128 3002678 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyAstrovirus capsid protein, P1 domain-like 8093126 3002535 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPositive stranded ssRNA viruses-like 8033958 3000918 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyAstrovirus capsid protein, P1 domain-like 8093126 3002535 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyNorovirus P2 domain-like 8093128 3002678 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyNorovirus P2 domain-like 8093128 3002678 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyAstrovirus capsid protein, P1 domain-like 8093126 3002535 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyPositive stranded ssRNA viruses-like 8033958 3000918 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyAstrovirus capsid protein, P1 domain-like 8093126 3002535 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ACalici_coat_C_Ne1ihmA3 A: beta barrelsX: cradle loop barrelH: Capsid protein protrusion (P) domain (From Topology)T: Capsid protein protrusion (P) domainF: Calici_coat_C_NECOD (1.6)
ACalici_coat_C_Ce1ihmA2 A: beta barrelsX: cradle loop barrelH: Capsid protein protrusion (P) domain (From Topology)T: Capsid protein protrusion (P) domainF: Calici_coat_C_CECOD (1.6)
ARhv_4e1ihmA4 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Rhv_4ECOD (1.6)
BCalici_coat_C_Ne1ihmB3 A: beta barrelsX: cradle loop barrelH: Capsid protein protrusion (P) domain (From Topology)T: Capsid protein protrusion (P) domainF: Calici_coat_C_NECOD (1.6)
BCalici_coat_C_Ce1ihmB2 A: beta barrelsX: cradle loop barrelH: Capsid protein protrusion (P) domain (From Topology)T: Capsid protein protrusion (P) domainF: Calici_coat_C_CECOD (1.6)
BRhv_4e1ihmB1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Rhv_4ECOD (1.6)
CCalici_coat_C_Ne1ihmC2 A: beta barrelsX: cradle loop barrelH: Capsid protein protrusion (P) domain (From Topology)T: Capsid protein protrusion (P) domainF: Calici_coat_C_NECOD (1.6)
CCalici_coat_C_Ce1ihmC1 A: beta barrelsX: cradle loop barrelH: Capsid protein protrusion (P) domain (From Topology)T: Capsid protein protrusion (P) domainF: Calici_coat_C_CECOD (1.6)
CRhv_4e1ihmC3 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Rhv_4ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF08435Calicivirus coat protein C-terminal (Calici_coat_C)Calicivirus coat protein C-terminal- Family