1JM7
Solution structure of the BRCA1/BARD1 RING-domain heterodimer
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1jm7a_ | Small proteins | RING/U-box | RING/U-box | RING finger domain, C3HC4 | brca1 RING domain | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d1jm7b_ | Small proteins | RING/U-box | RING/U-box | RING finger domain, C3HC4 | bard1 RING domain | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | RING finger domain, C3HC4 | 8024779 | 4000374 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | RING/U-box like | 8037158 | 3000160 | SCOP2 (2022-06-29) |
B | SCOP2 Family | RING finger domain, C3HC4 | 8004135 | 4000374 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | RING/U-box like | 8004136 | 3000160 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | zf-C3HC4_4 | e1jm7A1 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: RING/U-box | F: zf-C3HC4_4 | ECOD (1.6) |
B | zf-RING_6 | e1jm7B1 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: RING/U-box | F: zf-RING_6 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.40.10 | Alpha Beta | 2-Layer Sandwich | Herpes Virus-1 | Zinc/RING finger domain, C3HC4 (zinc finger) | CATH (4.3.0) |
B | 3.30.40.10 | Alpha Beta | 2-Layer Sandwich | Herpes Virus-1 | Zinc/RING finger domain, C3HC4 (zinc finger) | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00097 | Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) | Zinc finger, C3HC4 type (RING finger) | The C3HC4 type zinc-finger (RING finger) is a cysteine-rich domain of 40 to 60 residues that coordinates two zinc ions, and has the consensus sequence: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C where X is any amino acid [1]. Many protein ... | Domain | |
PF14835 | zf-RING of BARD1-type protein (zf-RING_6) | zf-RING of BARD1-type protein | The RING domain of the breast and ovarian cancer tumour-suppressor BRCA1 interacts with multiple cognate proteins, including the RING protein BARD1. Proper function of the BRCA1 RING domain is critical, as evidenced by the many cancer-predisposing mu ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR031099 | BRCA1-associated | Family | |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily | |
IPR025994 | BRCA1, serine-rich domain | Domain | |
IPR001841 | Zinc finger, RING-type | Domain | |
IPR011364 | Breast cancer type 1 susceptibility protein (BRCA1) | Family | |
IPR001357 | BRCT domain | Domain | |
IPR036420 | BRCT domain superfamily | Homologous Superfamily | |
IPR018957 | Zinc finger, C3HC4 RING-type | Domain | |
IPR017907 | Zinc finger, RING-type, conserved site | Conserved Site | |
IPR036770 | Ankyrin repeat-containing domain superfamily | Homologous Superfamily | |
IPR039503 | BARD1, Zinc finger, RING-type | Domain | |
IPR001357 | BRCT domain | Domain | |
IPR036420 | BRCT domain superfamily | Homologous Superfamily | |
IPR002110 | Ankyrin repeat | Repeat | |
IPR017907 | Zinc finger, RING-type, conserved site | Conserved Site | |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily | |
IPR001841 | Zinc finger, RING-type | Domain |