1MUU
2.0 A crystal structure of GDP-mannose dehydrogenase
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | 6-phosphogluconate dehydrogenase-like | 8056192 | 3000048 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | UDP-glucose/GDP-mannose dehydrogenase C-terminal domain-like | 8056193 | 3000011 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | 6-phosphogluconate dehydrogenase-like | 8056192 | 3000048 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | UDP-glucose/GDP-mannose dehydrogenase C-terminal domain-like | 8056193 | 3000011 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | 6-phosphogluconate dehydrogenase-like | 8056192 | 3000048 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | UDP-glucose/GDP-mannose dehydrogenase C-terminal domain-like | 8056193 | 3000011 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | 6-phosphogluconate dehydrogenase-like | 8056192 | 3000048 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | UDP-glucose/GDP-mannose dehydrogenase C-terminal domain-like | 8056193 | 3000011 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | UDPG_MGDP_dh | e1muuA1 | A: alpha arrays | X: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | H: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | T: 6-phosphogluconate dehydrogenase C-terminal domain-like | F: UDPG_MGDP_dh | ECOD (1.6) |
A | ApbA | e1muuA2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: ApbA | ECOD (1.6) |
A | UDPG_MGDP_dh_C | e1muuA3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: UDPG/MGDP dehydrogenase C-terminal domain | F: UDPG_MGDP_dh_C | ECOD (1.6) |
C | UDPG_MGDP_dh | e1muuC1 | A: alpha arrays | X: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | H: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | T: 6-phosphogluconate dehydrogenase C-terminal domain-like | F: UDPG_MGDP_dh | ECOD (1.6) |
C | ApbA | e1muuC2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: ApbA | ECOD (1.6) |
C | UDPG_MGDP_dh_C | e1muuC3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: UDPG/MGDP dehydrogenase C-terminal domain | F: UDPG_MGDP_dh_C | ECOD (1.6) |
D | UDPG_MGDP_dh | e1muuD1 | A: alpha arrays | X: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | H: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | T: 6-phosphogluconate dehydrogenase C-terminal domain-like | F: UDPG_MGDP_dh | ECOD (1.6) |
D | ApbA | e1muuD2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: ApbA | ECOD (1.6) |
D | UDPG_MGDP_dh_C | e1muuD3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: UDPG/MGDP dehydrogenase C-terminal domain | F: UDPG_MGDP_dh_C | ECOD (1.6) |
B | UDPG_MGDP_dh | e1muuB1 | A: alpha arrays | X: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | H: 6-phosphogluconate dehydrogenase C-terminal domain-like (From Topology) | T: 6-phosphogluconate dehydrogenase C-terminal domain-like | F: UDPG_MGDP_dh | ECOD (1.6) |
B | ApbA | e1muuB2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: ApbA | ECOD (1.6) |
B | UDPG_MGDP_dh_C | e1muuB3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: UDPG/MGDP dehydrogenase C-terminal domain | F: UDPG_MGDP_dh_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03720 | UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain (UDPG_MGDP_dh_C) | UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain | The UDP-glucose/GDP-mannose dehydrogenaseses are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [2]. | Domain | |
PF00984 | UDP-glucose/GDP-mannose dehydrogenase family, central domain (UDPG_MGDP_dh) | UDP-glucose/GDP-mannose dehydrogenase family, central domain | The UDP-glucose/GDP-mannose dehydrogenaseses are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [2]. | Domain | |
PF03721 | UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain (UDPG_MGDP_dh_N) | UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain | The UDP-glucose/GDP-mannose dehydrogenaseses are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [2]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR028358 | GDP-mannose 6-dehydrogenase | Family | |
IPR008927 | 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily | Homologous Superfamily | |
IPR036291 | NAD(P)-binding domain superfamily | Homologous Superfamily | |
IPR017476 | UDP-glucose/GDP-mannose dehydrogenase | Family | |
IPR014026 | UDP-glucose/GDP-mannose dehydrogenase, dimerisation | Domain | |
IPR014027 | UDP-glucose/GDP-mannose dehydrogenase, C-terminal | Domain | |
IPR036220 | UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily | Homologous Superfamily | |
IPR001732 | UDP-glucose/GDP-mannose dehydrogenase, N-terminal | Domain |