Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
J [auth H]d1nkwh_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
K [auth I]d1nkwi_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
L [auth J]d1nkwj_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
M [auth K]d1nkwk_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
N [auth L]d1nkwl_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
O [auth M]d1nkwm_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
P [auth N]d1nkwn_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
Q [auth O]d1nkwo_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
R [auth P]d1nkwp_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
S [auth Q]d1nkwq_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
T [auth R]d1nkwr_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
U [auth S]d1nkws_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
V [auth T]d1nkwt_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
W [auth U]d1nkwu_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
X [auth W]d1nkww_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
Y [auth X]d1nkwx_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
Z [auth Y]d1nkwy_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
AA [auth Z]d1nkwz_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
BA [auth 1]d1nkw1_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
CA [auth 2]d1nkw2_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
C [auth A]d1nkwa_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
DA [auth 3]d1nkw3_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
EA [auth 4]d1nkw4_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
D [auth B]d1nkwb_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
E [auth C]d1nkwc_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
F [auth D]d1nkwd_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
G [auth E]d1nkwe_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
H [auth F]d1nkwf_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)
I [auth G]d1nkwg_ Low resolution protein structures Ribosome and ribosomal fragments Ribosome and ribosomal fragments Large subunit Prokaryotic (50S subunit) (Deinococcus radiodurans ) [TaxId: 1299 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth H]SCOP2B SuperfamilyRibosomal protein L13 8038555 3001134 SCOP2B (2022-06-29)
K [auth I]SCOP2B Superfamily50S Ribosomal protein L14-like 8038558 3000433 SCOP2B (2022-06-29)
L [auth J]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8038561 3001045 SCOP2B (2022-06-29)
M [auth K]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8038562 3000884 SCOP2B (2022-06-29)
N [auth L]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8038564 3000995 SCOP2B (2022-06-29)
O [auth M]SCOP2B SuperfamilyTranslational machinery components 8038566 3000571 SCOP2B (2022-06-29)
P [auth N]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8038569 3000334 SCOP2B (2022-06-29)
Q [auth O]SCOP2B SuperfamilyRibosomal protein L20 8038571 3000563 SCOP2B (2022-06-29)
R [auth P]SCOP2B Superfamilyl21p-like 8038572 3002005 SCOP2B (2022-06-29)
S [auth Q]SCOP2B SuperfamilyRibosomal protein L22 8038576 3001078 SCOP2B (2022-06-29)
T [auth R]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8038577 3000210 SCOP2B (2022-06-29)
U [auth S]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8038578 3000334 SCOP2B (2022-06-29)
V [auth T]SCOP2B SuperfamilyRibosomal protein L25-like 8038580 3001161 SCOP2B (2022-06-29)
W [auth U]SCOP2B SuperfamilyRibosomal L27 protein-like 8038582 3000539 SCOP2B (2022-06-29)
X [auth W]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8038586 3000713 SCOP2B (2022-06-29)
Y [auth X]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8038590 3001378 SCOP2B (2022-06-29)
Z [auth Y]SCOP2 FamilyRibosomal protein L31p 8086127 4003966 SCOP2 (2022-06-29)
Z [auth Y]SCOP2 SuperfamilyL28p-like 8086128 3001966 SCOP2 (2022-06-29)
AA [auth Z]SCOP2B SuperfamilyZn-binding ribosomal proteins 8038593 3001320 SCOP2B (2022-06-29)
BA [auth 1]SCOP2B SuperfamilyZn-binding ribosomal proteins 8038526 3001320 SCOP2B (2022-06-29)
C [auth A]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8038534 3000334 SCOP2B (2022-06-29)
C [auth A]SCOP2B SuperfamilyNucleic acid-binding proteins 8038538 3000135 SCOP2B (2022-06-29)
DA [auth 3]SCOP2B SuperfamilyL35p-like 8038530 3000790 SCOP2B (2022-06-29)
EA [auth 4]SCOP2B SuperfamilyRibosomal protein L36 8038532 3001346 SCOP2B (2022-06-29)
D [auth B]SCOP2B SuperfamilyTranslational proteins 8038543 3000811 SCOP2B (2022-06-29)
E [auth C]SCOP2B SuperfamilyRibosomal protein L4 8038546 3001146 SCOP2B (2022-06-29)
F [auth D]SCOP2B SuperfamilyRL5-like 8038549 3001709 SCOP2B (2022-06-29)
G [auth E]SCOP2B SuperfamilyRibosomal protein L6 8038556 3000724 SCOP2B (2022-06-29)
G [auth E]SCOP2B SuperfamilyRibosomal protein L6 8038552 3000724 SCOP2B (2022-06-29)
H [auth F]SCOP2 FamilyRibosomal protein L9 N-domain 8070570 4001757 SCOP2 (2022-06-29)
H [auth F]SCOP2 SuperfamilyL9 N-domain-like 8070571 3000338 SCOP2 (2022-06-29)
I [auth G]SCOP2B SuperfamilyRibosomal L11/L12e N-terminal domain-like 8033405 3000950 SCOP2B (2022-06-29)
I [auth G]SCOP2B SuperfamilyRibosomal protein L11, C-terminal domain 8033402 3001186 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth H]Ribosomal_L13e1nkwH1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
K [auth I]Ribosomal_L14e1nkwI1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
L [auth J]Ribosomal_L27Ae1nkwJ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
M [auth K]Ribosomal_L16e1nkwK1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
N [auth L]Ribosomal_L17_1e1nkwL1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
O [auth M]Ribosomal_L18pe1nkwM1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
P [auth N]Ribosomal_L19e1nkwN1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
Q [auth O]Ribosomal_L20e1nkwO1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
R [auth P]Ribosomal_L21pe1nkwP1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
S [auth Q]Ribosomal_L22e1nkwQ1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
T [auth R]Ribosomal_L23_2e1nkwR1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
U [auth S]ribosomal_L24_1e1nkwS1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
V [auth T]Ribosomal_L25pe1nkwT2 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
V [auth T]Ribosomal_TL5_C_1e1nkwT1 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_C_1ECOD (1.6)
W [auth U]Ribosomal_L27e1nkwU1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
X [auth W]Ribosomal_L29e1nkwW1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
Y [auth X]Ribosomal_L30e1nkwX1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
Z [auth Y]Ribosomal_L31e1nkwY1 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
AA [auth Z]Ribosomal_L32pe1nkwZ1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
BA [auth 1]Ribosomal_L33e1nkw11 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
CA [auth 2]Ribosomal_L34e1nkw21 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
C [auth A]Ribosomal_L2_1e1nkwA1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
C [auth A]Ribosomal_L2_Ce1nkwA2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
DA [auth 3]Ribosomal_L35pe1nkw31 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
EA [auth 4]Ribosomal_L36e1nkw41 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
D [auth B]Ribosomal_L3e1nkwB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
E [auth C]Ribosomal_L4e1nkwC1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
F [auth D]Ribosomal_L5_Ce1nkwD1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
G [auth E]Ribosomal_L6e1nkwE1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
G [auth E]Ribosomal_L6_1e1nkwE2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
H [auth F]Ribosomal_L9_Ne1nkwF1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
I [auth G]Ribosomal_L11e1nkwG1 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
I [auth G]Ribosomal_L11_Ne1nkwG2 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth H]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
L [auth J]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
N [auth L]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
P [auth N]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
Q [auth O]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
R [auth P]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
S [auth Q]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
T [auth R]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
U [auth S]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
U [auth S]PF00467KOW motif (KOW)KOW motif- Family
V [auth T]PF14693Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C)Ribosomal protein TL5, C-terminal domainThis family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ...This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC proteins. TL5 or CTC are not found in Eukarya or Archaea. In some Bacteria, including E. coli, this ribosomal subunit occurs as a single domain protein (named Ribosomal subunit L25), where the only domain is homologous to TL5 N-terminal domain (hence included in family Pfam:PF01386). The function of the C-terminal domain of TLC is at present unknown.
Domain
V [auth T]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
W [auth U]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
X [auth W]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
Y [auth X]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
Z [auth Y]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
AA [auth Z]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
BA [auth 1]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
CA [auth 2]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
C [auth A]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
C [auth A]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
DA [auth 3]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
D [auth B]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
E [auth C]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
F [auth D]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
F [auth D]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
G [auth E]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
H [auth F]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
I [auth G]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
I [auth G]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 0]23S ribosomal RNA---
J [auth H]50S ribosomal protein L13
K [auth I]50S ribosomal protein L14
L [auth J]50S ribosomal protein L15
M [auth K]50S ribosomal protein L16
N [auth L]50S ribosomal protein L17
O [auth M]50S ribosomal protein L18
P [auth N]50S ribosomal protein L19
Q [auth O]50S ribosomal protein L20
R [auth P]50S ribosomal protein L21
S [auth Q]50S ribosomal protein L22
B [auth 9]5S ribosomal RNA---
T [auth R]50S ribosomal protein L23
U [auth S]50S ribosomal protein L24
V [auth T]general stress protein CTC
W [auth U]50S ribosomal protein L27
X [auth W]50S ribosomal protein L29
Y [auth X]50S ribosomal protein L30
Z [auth Y]50S ribosomal protein L31
AA [auth Z]50S ribosomal protein L32
BA [auth 1]50S ribosomal protein L33
CA [auth 2]50S ribosomal protein L34
C [auth A]50S ribosomal protein L2
DA [auth 3]50S ribosomal protein L35
EA [auth 4]50S ribosomal protein L36
D [auth B]50S ribosomal protein L3
E [auth C]50S ribosomal protein L4
F [auth D]50S ribosomal protein L5
G [auth E]50S ribosomal protein L6
H [auth F]50S ribosomal protein L9
I [auth G]50S ribosomal protein L11

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth H]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
J [auth H]IPR005822Large ribosomal subunit protein uL13Family
J [auth H]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
J [auth H]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
K [auth I]IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
K [auth I]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
K [auth I]IPR000218Large ribosomal subunit protein uL14Family
K [auth I]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
L [auth J]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
L [auth J]IPR021131Large ribosomal subunit protein uL15/eL18Domain
L [auth J]IPR030878Large ribosomal subunit protein uL15Family
L [auth J]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
L [auth J]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
M [auth K]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
M [auth K]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
M [auth K]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
M [auth K]IPR016180Large ribosomal subunit protein uL16 domainDomain
M [auth K]IPR047873Large ribosomal subunit protein uL16Family
N [auth L]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
N [auth L]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
N [auth L]IPR000456Large ribosomal subunit protein bL17Family
O [auth M]IPR005484Large ribosomal subunit protein uL18Family
O [auth M]IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
P [auth N]IPR001857Large ribosomal subunit protein bL19Family
P [auth N]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
P [auth N]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
P [auth N]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Q [auth O]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
Q [auth O]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
Q [auth O]IPR005813Large ribosomal subunit protein bL20Family
R [auth P]IPR028909Large ribosomal subunit protein bL21-likeFamily
R [auth P]IPR001787Large ribosomal subunit protein bL21Family
R [auth P]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
S [auth Q]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
S [auth Q]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
S [auth Q]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
S [auth Q]IPR001063Large ribosomal subunit protein uL22Family
S [auth Q]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
T [auth R]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
T [auth R]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
T [auth R]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
T [auth R]IPR013025Large ribosomal subunit protein uL23-likeFamily
U [auth S]IPR003256Large ribosomal subunit protein uL24Family
U [auth S]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
U [auth S]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
U [auth S]IPR005824KOWDomain
U [auth S]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
U [auth S]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
V [auth T]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
V [auth T]IPR001021Ribosomal protein bL25, long-formFamily
V [auth T]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
V [auth T]IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
V [auth T]IPR020057Large ribosomal subunit protein bL25, beta domainDomain
V [auth T]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
V [auth T]IPR050070Bacterial ribosomal protein bL25Family
W [auth U]IPR001684Large ribosomal subunit protein bL27Family
W [auth U]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
X [auth W]IPR050063Universal ribosomal protein uL29Family
X [auth W]IPR001854Large ribosomal subunit protein uL29Family
X [auth W]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
X [auth W]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
Y [auth X]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
Y [auth X]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
Y [auth X]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
Z [auth Y]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
Z [auth Y]IPR027491Large ribosomal subunit protein bL31 type AFamily
Z [auth Y]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
Z [auth Y]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
AA [auth Z]IPR002677Large ribosomal subunit protein bL32Family
AA [auth Z]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AA [auth Z]IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
BA [auth 1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BA [auth 1]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
BA [auth 1]IPR001705Large ribosomal subunit protein bL33Family
BA [auth 1]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
CA [auth 2]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
CA [auth 2]IPR000271Large ribosomal subunit protein bL34Family
C [auth A]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
C [auth A]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
C [auth A]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
C [auth A]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
C [auth A]IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
C [auth A]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth A]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
C [auth A]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
C [auth A]IPR002171Large ribosomal subunit protein uL2Family
DA [auth 3]IPR021137Large ribosomal subunit protein bL35-likeFamily
DA [auth 3]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
DA [auth 3]IPR001706Large ribosomal subunit protein bL35Family
DA [auth 3]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
EA [auth 4]IPR000473Large ribosomal subunit protein bL36Family
EA [auth 4]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
D [auth B]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
D [auth B]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
D [auth B]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
D [auth B]IPR000597Large ribosomal subunit protein uL3Family
E [auth C]IPR013005Large ribosomal subunit protein uL4-likeFamily
E [auth C]IPR002136Large ribosomal subunit protein uL4Family
E [auth C]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
F [auth D]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
F [auth D]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
F [auth D]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
F [auth D]IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
F [auth D]IPR002132Large ribosomal subunit protein uL5Family
G [auth E]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
G [auth E]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
G [auth E]IPR000702Large ribosomal subunit protein uL6-likeFamily
G [auth E]IPR019906Large ribosomal subunit protein uL6, bacterial-typeFamily
H [auth F]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
H [auth F]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
H [auth F]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
H [auth F]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
H [auth F]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
H [auth F]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
H [auth F]IPR000244Large ribosomal subunit protein bL9Family
I [auth G]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
I [auth G]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
I [auth G]IPR000911Ribosomal protein uL11Family
I [auth G]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
I [auth G]IPR006519Large ribosomal subunit protein uL11, bacterial-typeFamily
I [auth G]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
I [auth G]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily