Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
A [auth L]d1rbol1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase (Spinacia oleracea ) [TaxId: 3562 ], SCOPe (2.08)
A [auth L]d1rbol2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase (Spinacia oleracea ) [TaxId: 3562 ], SCOPe (2.08)
C [auth B]d1rbob1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase (Spinacia oleracea ) [TaxId: 3562 ], SCOPe (2.08)
C [auth B]d1rbob2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase (Spinacia oleracea ) [TaxId: 3562 ], SCOPe (2.08)
Ed1rboe1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase (Spinacia oleracea ) [TaxId: 3562 ], SCOPe (2.08)
Ed1rboe2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase (Spinacia oleracea ) [TaxId: 3562 ], SCOPe (2.08)
G [auth H]d1rboh1 Alpha and beta proteins (a/b) TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Ribulose 1,5-bisphosphate carboxylase-oxygenase (Spinacia oleracea ) [TaxId: 3562 ], SCOPe (2.08)
G [auth H]d1rboh2 Alpha and beta proteins (a+b) Ferredoxin-like RuBisCO, large subunit, small (N-terminal) domain Ribulose 1,5-bisphosphate carboxylase-oxygenase Ribulose 1,5-bisphosphate carboxylase-oxygenase (Spinacia oleracea ) [TaxId: 3562 ], SCOPe (2.08)
B [auth S]d1rbos_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase (Spinacia oleracea ) [TaxId: 3562 ], SCOPe (2.08)
D [auth C]d1rboc_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase (Spinacia oleracea ) [TaxId: 3562 ], SCOPe (2.08)
Fd1rbof_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase (Spinacia oleracea ) [TaxId: 3562 ], SCOPe (2.08)
H [auth I]d1rboi_ Alpha and beta proteins (a+b) RuBisCO, small subunit RuBisCO, small subunit RuBisCO, small subunit Ribulose 1,5-bisphosphate carboxylase-oxygenase (Spinacia oleracea ) [TaxId: 3562 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth L]SCOP2B SuperfamilyRuBisCO, large subunit, small (N-terminal) domain 8035405 3001258 SCOP2B (2022-06-29)
A [auth L]SCOP2B SuperfamilyRuBisCo, C-terminal domain 8043674 3000552 SCOP2B (2022-06-29)
C [auth B]SCOP2B SuperfamilyRuBisCO, large subunit, small (N-terminal) domain 8035405 3001258 SCOP2B (2022-06-29)
C [auth B]SCOP2B SuperfamilyRuBisCo, C-terminal domain 8043674 3000552 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyRuBisCO, large subunit, small (N-terminal) domain 8035405 3001258 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyRuBisCo, C-terminal domain 8043674 3000552 SCOP2B (2022-06-29)
G [auth H]SCOP2B SuperfamilyRuBisCo, C-terminal domain 8043674 3000552 SCOP2B (2022-06-29)
G [auth H]SCOP2B SuperfamilyRuBisCO, large subunit, small (N-terminal) domain 8035405 3001258 SCOP2B (2022-06-29)
B [auth S]SCOP2B SuperfamilyRuBisCO, small subunit 8035809 3001622 SCOP2B (2022-06-29)
D [auth C]SCOP2B SuperfamilyRuBisCO, small subunit 8035809 3001622 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyRuBisCO, small subunit 8035809 3001622 SCOP2B (2022-06-29)
H [auth I]SCOP2B SuperfamilyRuBisCO, small subunit 8035809 3001622 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth L]RuBisCO_large_Ne1rboL1 A: a+b two layersX: Alpha-beta plaitsH: RuBisCO, large subunit, small (N-terminal) domain (From Topology)T: RuBisCO, large subunit, small (N-terminal) domainF: RuBisCO_large_NECOD (1.6)
A [auth L]RuBisCO_largee1rboL2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: RuBisCO_largeECOD (1.6)
C [auth B]RuBisCO_large_Ne1rboB1 A: a+b two layersX: Alpha-beta plaitsH: RuBisCO, large subunit, small (N-terminal) domain (From Topology)T: RuBisCO, large subunit, small (N-terminal) domainF: RuBisCO_large_NECOD (1.6)
C [auth B]RuBisCO_largee1rboB2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: RuBisCO_largeECOD (1.6)
ERuBisCO_large_Ne1rboE1 A: a+b two layersX: Alpha-beta plaitsH: RuBisCO, large subunit, small (N-terminal) domain (From Topology)T: RuBisCO, large subunit, small (N-terminal) domainF: RuBisCO_large_NECOD (1.6)
ERuBisCO_largee1rboE2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: RuBisCO_largeECOD (1.6)
G [auth H]RuBisCO_large_Ne1rboH1 A: a+b two layersX: Alpha-beta plaitsH: RuBisCO, large subunit, small (N-terminal) domain (From Topology)T: RuBisCO, large subunit, small (N-terminal) domainF: RuBisCO_large_NECOD (1.6)
G [auth H]RuBisCO_largee1rboH2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: RuBisCO_largeECOD (1.6)
B [auth S]RuBisCO_smalle1rboS1 A: a+b two layersX: Reverse ferredoxinH: RuBisCO, small subunit (From Topology)T: RuBisCO, small subunitF: RuBisCO_smallECOD (1.6)
D [auth C]RuBisCO_smalle1rboC1 A: a+b two layersX: Reverse ferredoxinH: RuBisCO, small subunit (From Topology)T: RuBisCO, small subunitF: RuBisCO_smallECOD (1.6)
FRuBisCO_smalle1rboF1 A: a+b two layersX: Reverse ferredoxinH: RuBisCO, small subunit (From Topology)T: RuBisCO, small subunitF: RuBisCO_smallECOD (1.6)
H [auth I]RuBisCO_smalle1rboI1 A: a+b two layersX: Reverse ferredoxinH: RuBisCO, small subunit (From Topology)T: RuBisCO, small subunitF: RuBisCO_smallECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A [auth L]3.30.70.150 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits RuBisCO large subunit, N-terminal domainCATH (4.3.0)
A [auth L]3.20.20.110 Alpha Beta Alpha-Beta Barrel TIM Barrel Ribulose bisphosphate carboxylase, large subunit, C-terminal domainCATH (4.3.0)
C [auth B]3.30.70.150 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits RuBisCO large subunit, N-terminal domainCATH (4.3.0)
C [auth B]3.20.20.110 Alpha Beta Alpha-Beta Barrel TIM Barrel Ribulose bisphosphate carboxylase, large subunit, C-terminal domainCATH (4.3.0)
E3.30.70.150 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits RuBisCO large subunit, N-terminal domainCATH (4.3.0)
E3.20.20.110 Alpha Beta Alpha-Beta Barrel TIM Barrel Ribulose bisphosphate carboxylase, large subunit, C-terminal domainCATH (4.3.0)
G [auth H]3.30.70.150 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits RuBisCO large subunit, N-terminal domainCATH (4.3.0)
G [auth H]3.20.20.110 Alpha Beta Alpha-Beta Barrel TIM Barrel Ribulose bisphosphate carboxylase, large subunit, C-terminal domainCATH (4.3.0)
B [auth S]3.30.190.10 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase Ribulose bisphosphate carboxylase, small subunitCATH (4.3.0)
D [auth C]3.30.190.10 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase Ribulose bisphosphate carboxylase, small subunitCATH (4.3.0)
F3.30.190.10 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase Ribulose bisphosphate carboxylase, small subunitCATH (4.3.0)
H [auth I]3.30.190.10 Alpha Beta 2-Layer Sandwich Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase Ribulose bisphosphate carboxylase, small subunitCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth L],
C [auth B],
E,
G [auth H]
PF02788Ribulose bisphosphate carboxylase large chain, N-terminal domain (RuBisCO_large_N)Ribulose bisphosphate carboxylase large chain, N-terminal domainThe N-terminal domain of RuBisCO large chain adopts a ferredoxin-like fold.Domain
A [auth L],
C [auth B],
E,
G [auth H]
PF00016Ribulose bisphosphate carboxylase large chain, catalytic domain (RuBisCO_large)Ribulose bisphosphate carboxylase large chain, catalytic domainThe C-terminal domain of RuBisCO large chain is the catalytic domain adopting a TIM barrel fold.Domain
B [auth S],
D [auth C],
F,
H [auth I]
PF00101Ribulose bisphosphate carboxylase, small chain (RuBisCO_small)Ribulose bisphosphate carboxylase, small chain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth L],
C [auth B],
E,
G [auth H]
RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE
B [auth S],
D [auth C],
F,
H [auth I]
RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE