Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad3cx5a1 Alpha and beta proteins (a+b) LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase MPP-like Cytochrome bc1 core subunit 1 (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Ld3cx5l1 Alpha and beta proteins (a+b) LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase MPP-like Cytochrome bc1 core subunit 1 (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Bd3cx5b1 Alpha and beta proteins (a+b) LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase MPP-like Cytochrome bc1 core subunit 2 (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Md3cx5m1 Alpha and beta proteins (a+b) LuxS/MPP-like metallohydrolase LuxS/MPP-like metallohydrolase MPP-like Cytochrome bc1 core subunit 2 (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Cd3cx5c2 Membrane and cell surface proteins and peptides Heme-binding four-helical bundle Transmembrane di-heme cytochromes Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Cd3cx5c1 Membrane and cell surface proteins and peptides a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches automated matches (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Nd3cx5n2 Membrane and cell surface proteins and peptides Heme-binding four-helical bundle Transmembrane di-heme cytochromes Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Nd3cx5n1 Membrane and cell surface proteins and peptides a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches automated matches (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Dd3cx5d1 All alpha proteins Cytochrome c Cytochrome c Cytochrome bc1 domain Cytochrome bc1 domain (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Dd3cx5d2 Membrane and cell surface proteins and peptides Single transmembrane helix Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Od3cx5o1 All alpha proteins Cytochrome c Cytochrome c Cytochrome bc1 domain Cytochrome bc1 domain (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Od3cx5o2 Membrane and cell surface proteins and peptides Single transmembrane helix Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Ed3cx5e1 All beta proteins ISP domain ISP domain Rieske iron-sulfur protein (ISP) ISP subunit of the mitochondrial cytochrome bc1-complex, water-soluble domain (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Ed3cx5e2 Membrane and cell surface proteins and peptides Single transmembrane helix ISP transmembrane anchor ISP transmembrane anchor Iron-sulfur subunit (ISP) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane region (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Pd3cx5p1 All beta proteins ISP domain ISP domain Rieske iron-sulfur protein (ISP) ISP subunit of the mitochondrial cytochrome bc1-complex, water-soluble domain (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Pd3cx5p2 Membrane and cell surface proteins and peptides Single transmembrane helix ISP transmembrane anchor ISP transmembrane anchor Iron-sulfur subunit (ISP) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane region (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Fd3cx5f_ Membrane and cell surface proteins and peptides Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Qd3cx5q_ Membrane and cell surface proteins and peptides Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Gd3cx5g_ Membrane and cell surface proteins and peptides 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Rd3cx5r_ Membrane and cell surface proteins and peptides 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Hd3cx5h_ Membrane and cell surface proteins and peptides Single transmembrane helix Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Sd3cx5s_ Membrane and cell surface proteins and peptides Single transmembrane helix Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Id3cx5i_ Membrane and cell surface proteins and peptides Single transmembrane helix Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Td3cx5t_ Membrane and cell surface proteins and peptides Single transmembrane helix Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) automated matches (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)
Jd3cx5j_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Immunoglobulin heavy chain variable domain, VH house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ud3cx5u_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Immunoglobulin heavy chain variable domain, VH house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Kd3cx5k_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Immunoglobulin light chain kappa variable domain, VL-kappa house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Vd3cx5v_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) Immunoglobulin light chain kappa variable domain, VL-kappa house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Wd3cx5w_ All alpha proteins Cytochrome c Cytochrome c monodomain cytochrome c Mitochondrial cytochrome c (Saccharomyces cerevisiae ) [TaxId: 4932 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyMPP-like 8027913 4002871 SCOP2 (2022-06-29)
ASCOP2 FamilyMPP-like 8027915 4002871 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyLuxS/MPP-like metallohydrolase 8040292 3001831 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyLuxS/MPP-like metallohydrolase 8040294 3001831 SCOP2 (2022-06-29)
LSCOP2B SuperfamilyLuxS/MPP-like metallohydrolase 8040292 3001831 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyLuxS/MPP-like metallohydrolase 8040294 3001831 SCOP2B (2022-06-29)
BSCOP2 FamilyMPP-like 8027918 4002871 SCOP2 (2022-06-29)
BSCOP2 FamilyMPP-like 8027921 4002871 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyLuxS/MPP-like metallohydrolase 8040297 3001831 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyLuxS/MPP-like metallohydrolase 8040300 3001831 SCOP2 (2022-06-29)
MSCOP2B SuperfamilyLuxS/MPP-like metallohydrolase 8040297 3001831 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyLuxS/MPP-like metallohydrolase 8040300 3001831 SCOP2B (2022-06-29)
CSCOP2 Familya domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8027920 4002216 SCOP2 (2022-06-29)
CSCOP2 FamilyCytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8027923 4002208 SCOP2 (2022-06-29)
CSCOP2 Superfamilya domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040299 3000966 SCOP2 (2022-06-29)
CSCOP2 SuperfamilyTransmembrane di-heme cytochromes 8040302 3000517 SCOP2 (2022-06-29)
NSCOP2B Superfamilya domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040299 3000966 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyTransmembrane di-heme cytochromes 8040302 3000517 SCOP2B (2022-06-29)
DSCOP2 FamilyCytochrome bc1 domain 8027925 4000656 SCOP2 (2022-06-29)
DSCOP2 FamilyCytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 8027926 4002056 SCOP2 (2022-06-29)
DSCOP2 SuperfamilyCytochrome c 8040304 3000815 SCOP2 (2022-06-29)
DSCOP2 SuperfamilyCytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 8040305 3000762 SCOP2 (2022-06-29)
OSCOP2B SuperfamilyCytochrome c 8040304 3000815 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyCytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 8040305 3000762 SCOP2B (2022-06-29)
ESCOP2 FamilyRieske iron-sulfur protein (ISP) 8027928 4001667 SCOP2 (2022-06-29)
ESCOP2 FamilyISP transmembrane anchor 8027929 4002051 SCOP2 (2022-06-29)
ESCOP2 SuperfamilyISP domain 8040307 3000233 SCOP2 (2022-06-29)
ESCOP2 SuperfamilyISP transmembrane anchor 8040308 3000753 SCOP2 (2022-06-29)
PSCOP2B SuperfamilyISP transmembrane anchor 8040308 3000753 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyISP domain 8040307 3000233 SCOP2B (2022-06-29)
FSCOP2 FamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8027933 4002082 SCOP2 (2022-06-29)
FSCOP2 SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040312 3000806 SCOP2 (2022-06-29)
QSCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040312 3000806 SCOP2B (2022-06-29)
GSCOP2 Family14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8027936 4002070 SCOP2 (2022-06-29)
GSCOP2 Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040315 3000797 SCOP2 (2022-06-29)
RSCOP2B Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040315 3000797 SCOP2B (2022-06-29)
HSCOP2 FamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8027939 4002057 SCOP2 (2022-06-29)
HSCOP2 SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040318 3000770 SCOP2 (2022-06-29)
SSCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040318 3000770 SCOP2B (2022-06-29)
ISCOP2 FamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8027940 4002059 SCOP2 (2022-06-29)
ISCOP2 SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040319 3000779 SCOP2 (2022-06-29)
TSCOP2B SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8040319 3000779 SCOP2B (2022-06-29)
WSCOP2B SuperfamilyCytochrome c 8036427 3000815 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APeptidase_M16_Ce3cx5A2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16_CECOD (1.6)
APeptidase_M16e3cx5A1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
LPeptidase_M16_Ce3cx5L2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16_CECOD (1.6)
LPeptidase_M16e3cx5L1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
BPeptidase_M16e3cx5B1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
BUNK_F_TYPEe3cx5B2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: UNK_F_TYPEECOD (1.6)
MPeptidase_M16e3cx5M1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
MUNK_F_TYPEe3cx5M2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: UNK_F_TYPEECOD (1.6)
CCytochrom_B_Ce3cx5C1 A: alpha bundlesX: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: Cytochrom_B_CECOD (1.6)
CCytochrome_Be3cx5C2 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: Cytochrome_BECOD (1.6)
NCytochrom_B_Ce3cx5N1 A: alpha bundlesX: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: Cytochrom_B_CECOD (1.6)
NCytochrome_Be3cx5N2 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: Cytochrome_BECOD (1.6)
DCytochrom_C1_Ne3cx5D1 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: Cytochrom_C1_NECOD (1.6)
DCytochrom_C1_Ce3cx5D2 A: extended segmentsX: cytochrome c1 transmembrane anchor (From Topology)H: cytochrome c1 transmembrane anchor (From Topology)T: cytochrome c1 transmembrane anchorF: Cytochrom_C1_CECOD (1.6)
OCytochrom_C1_Ne3cx5O1 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: Cytochrom_C1_NECOD (1.6)
OCytochrom_C1_Ce3cx5O2 A: extended segmentsX: cytochrome c1 transmembrane anchor (From Topology)H: cytochrome c1 transmembrane anchor (From Topology)T: cytochrome c1 transmembrane anchorF: Cytochrom_C1_CECOD (1.6)
ERieske_cytochrome_bc1e3cx5E1 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: Rieske_cytochrome_bc1ECOD (1.6)
ERieske_6e3cx5E3 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: Rieske_6ECOD (1.6)
EUCR_TMe3cx5E2 A: extended segmentsX: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)T: iron-sulfur subunit (ISP) transmembrane anchorF: UCR_TMECOD (1.6)
PRieske_cytochrome_bc1e3cx5P1 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: Rieske_cytochrome_bc1ECOD (1.6)
PRieske_6e3cx5P3 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: Rieske_6ECOD (1.6)
PUCR_TMe3cx5P2 A: extended segmentsX: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)T: iron-sulfur subunit (ISP) transmembrane anchorF: UCR_TMECOD (1.6)
FUCR_hingee3cx5F1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_hingeECOD (1.6)
QUCR_hingee3cx5Q1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_hingeECOD (1.6)
GUCR_14kDe3cx5G1 A: alpha arraysX: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_14kDECOD (1.6)
RUCR_14kDe3cx5R1 A: alpha arraysX: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_14kDECOD (1.6)
HUcrQe3cx5H1 A: extended segmentsX: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UcrQECOD (1.6)
SUcrQe3cx5S1 A: extended segmentsX: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UcrQECOD (1.6)
IUCR_UQCRX_QCR9e3cx5I1 A: extended segmentsX: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_UQCRX_QCR9ECOD (1.6)
TUCR_UQCRX_QCR9e3cx5T1 A: extended segmentsX: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_UQCRX_QCR9ECOD (1.6)
JV-set_8e3cx5J1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_8ECOD (1.6)
UV-set_8e3cx5U1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_8ECOD (1.6)
KV-sete3cx5K1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-setECOD (1.6)
VV-sete3cx5V1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-setECOD (1.6)
WCytochrom_C_1e3cx5W1 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: Cytochrom_C_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.830.10 Alpha Beta 2-Layer Sandwich Cytochrome Bc1 Complex Chain A, domain 1CATH (4.3.0)
L3.30.830.10 Alpha Beta 2-Layer Sandwich Cytochrome Bc1 Complex Chain A, domain 1CATH (4.3.0)
B3.30.830.10 Alpha Beta 2-Layer Sandwich Cytochrome Bc1 Complex Chain A, domain 1CATH (4.3.0)
M3.30.830.10 Alpha Beta 2-Layer Sandwich Cytochrome Bc1 Complex Chain A, domain 1CATH (4.3.0)
C1.20.810.10 Mainly Alpha Up-down Bundle Cytochrome Bc1 Complex Chain CCATH (4.3.0)
N1.20.810.10 Mainly Alpha Up-down Bundle Cytochrome Bc1 Complex Chain CCATH (4.3.0)
D1.10.760.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain D, domain 2CATH (4.3.0)
D1.20.5.100 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome c1, transmembrane anchor, C-terminalCATH (4.3.0)
O1.10.760.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain D, domain 2CATH (4.3.0)
O1.20.5.100 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome c1, transmembrane anchor, C-terminalCATH (4.3.0)
E1.20.5.270 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Ubiquinol cytochrome reductase, transmembrane domainCATH (4.3.0)
E2.102.10.10 Mainly Beta 3-layer Sandwich Rieske Iron-sulfur Protein Rieske [2Fe-2S] iron-sulphur domainCATH (4.3.0)
P1.20.5.270 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Ubiquinol cytochrome reductase, transmembrane domainCATH (4.3.0)
P2.102.10.10 Mainly Beta 3-layer Sandwich Rieske Iron-sulfur Protein Rieske [2Fe-2S] iron-sulphur domainCATH (4.3.0)
F1.10.287.20 Mainly Alpha Orthogonal Bundle Helix Hairpins Ubiquinol-cytochrome C reductase hinge domainCATH (4.3.0)
Q1.10.287.20 Mainly Alpha Orthogonal Bundle Helix Hairpins Ubiquinol-cytochrome C reductase hinge domainCATH (4.3.0)
G1.10.1090.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain FCATH (4.3.0)
R1.10.1090.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain FCATH (4.3.0)
H1.20.5.210 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome b-c1 complex subunit 8CATH (4.3.0)
S1.20.5.210 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome b-c1 complex subunit 8CATH (4.3.0)
I1.20.5.260 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome b-c1 complex subunit 9CATH (4.3.0)
T1.20.5.260 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Cytochrome b-c1 complex subunit 9CATH (4.3.0)
J2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
U2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
K2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
V2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
W1.10.760.10 Mainly Alpha Orthogonal Bundle Cytochrome Bc1 Complex Chain D, domain 2CATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
J, U
FV-FRAGMENT VH Mus musculus (house mouse) IGHV3-6*02, IGHV3-6*01, IGHJ4*01 V-DOMAIN VH IG FV-HEAVY_KAPPA IMGT (202444-0)
K, V
FV-FRAGMENT V-KAPPA Mus musculus (house mouse) IGKV10-94*03, IGKV10-96*03, IGKV10-94*04, IGKV10-94*06, IGKV10-96*04, IGKV10-94*05, IGKV10-94*08, IGKJ1*01 V-DOMAIN V-KAPPA IG FV-HEAVY_KAPPA IMGT (202444-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
J, U
Heavy ChainIGHV3 -cytochrome b-c1 complex subunit rieske, mitochondrialSAbDab (2024-11-08)
K, V
Light ChainIGKV10 Kappacytochrome b-c1 complex subunit rieske, mitochondrialSAbDab (2024-11-08)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, L
PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1].Domain
A, L
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
B, M
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
C, N
PF00032Cytochrome b(C-terminal)/b6/petD (Cytochrom_B_C)Cytochrome b(C-terminal)/b6/petD- Domain
C, N
PF00033Cytochrome b/b6/petB (Cytochrome_B)Cytochrome b/b6/petB- Domain
D, O
PF02167Cytochrome C1 family (Cytochrom_C1)Cytochrome C1 family- Family
E, P
PF02921Ubiquinol cytochrome reductase transmembrane region (UCR_TM)Ubiquinol cytochrome reductase transmembrane region- Family
E, P
PF00355Rieske [2Fe-2S] domain (Rieske)Rieske [2Fe-2S] domainThe rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ...The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in this motif form a disulphide bridge, which stabilises the protein [4].
Domain
F, Q
PF02320Ubiquinol-cytochrome C reductase hinge protein (UCR_hinge)Ubiquinol-cytochrome C reductase hinge protein- Family
G, R
PF02271Ubiquinol-cytochrome C reductase complex 14kD subunit (UCR_14kD)Ubiquinol-cytochrome C reductase complex 14kD subunit- Family
H, S
PF02939UcrQ family (UcrQ)UcrQ family- Family
I, T
PF05365Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like (UCR_UQCRX_QCR9)Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like- Family
PF00034Cytochrome c (Cytochrom_C)Cytochrome cThe Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, Pfam:PF06181, has now been merged into this family.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, L
Cytochrome b-c1 complex subunit 1, mitochondrial
B, M
Cytochrome b-c1 complex subunit 2, mitochondrial
C, N
CYTOCHROME B
D, O
Cytochrome c1, heme protein, mitochondrial
E, P
Cytochrome b-c1 complex subunit Rieske, mitochondrial
F, Q
Cytochrome b-c1 complex subunit 6-
G, R
Cytochrome b-c1 complex subunit 7-
H, S
Cytochrome b-c1 complex subunit 8
I, T
Cytochrome b-c1 complex subunit 9-
J, U
HEAVY CHAIN (VH) OF FV-FRAGMENT---
K, V
LIGHT CHAIN (VL) OF FV-FRAGMENT---
Cytochrome c iso-1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, L
IPR007863Peptidase M16, C-terminalDomain
A, L
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
A, L
IPR050361Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase ComplexFamily
A, L
IPR011765Peptidase M16, N-terminalDomain
B, M
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
B, M
IPR050361Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase ComplexFamily
B, M
IPR011765Peptidase M16, N-terminalDomain
B, M
IPR001431Peptidase M16, zinc-binding siteBinding Site
C, N
IPR036150Cytochrome b/b6, C-terminal domain superfamilyHomologous Superfamily
C, N
IPR027387Cytochrome b/b6-like domain superfamilyHomologous Superfamily
C, N
IPR048260Cytochrome b/b6, C-terminal domain, eukaryotic/bacterialDomain
C, N
IPR016174Di-haem cytochrome, transmembraneHomologous Superfamily
C, N
IPR005798Cytochrome b/b6, C-terminalDomain
C, N
IPR048259Cytochrome b/b6, N-terminal domain, eukaryotic/bacterialDomain
C, N
IPR030689Cytochrome bFamily
C, N
IPR005797Cytochrome b/b6, N-terminal domainDomain
D, O
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
D, O
IPR002326Cytochrome c1Family
D, O
IPR009056Cytochrome c-like domainDomain
D, O
IPR021157Cytochrome c1, transmembrane anchor, C-terminalHomologous Superfamily
E, P
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
E, P
IPR014349Rieske iron-sulphur proteinFamily
E, P
IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainDomain
E, P
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
E, P
IPR005805Rieske iron-sulphur protein, C-terminalDomain
E, P
IPR037008Cytochrome bc1 complex subunit Rieske, transmembrane domain superfamilyHomologous Superfamily
E, P
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain
F, Q
IPR023184Ubiquinol-cytochrome C reductase hinge domainDomain
F, Q
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyHomologous Superfamily
G, R
IPR003197Cytochrome b-c1 complex subunit 7Family
G, R
IPR036544Cytochrome b-c1 complex subunit 7 superfamilyHomologous Superfamily
H, S
IPR004205Cytochrome b-c1 complex subunit 8Family
H, S
IPR036642Cytochrome b-c1 complex subunit 8 superfamilyHomologous Superfamily
I, T
IPR008027Cytochrome b-c1 complex subunit 9Family
I, T
IPR036656Cytochrome b-c1 complex subunit 9 superfamilyHomologous Superfamily
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
IPR009056Cytochrome c-like domainDomain
IPR002327Cytochrome c, class IA/ IBFamily

Membrane Protein Annotation: OPM OPM Database Homepage

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
MemProtMDAnnotated as membrane protein by MemProtMD

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
M3L Parent Component: LYS

RESIDAA0074

PSI-MOD :  N6,N6,N6-trimethyl-L-lysine MOD:00083