3RCW

Crystal Structure of the bromodomain of human BRD1


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyBromodomain 8084241 3001843 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyBromodomain 8084241 3001843 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyBromodomain 8084241 3001843 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyBromodomain 8084241 3001843 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyBromodomain 8084241 3001843 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyBromodomain 8084241 3001843 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyBromodomain 8084241 3001843 SCOP2B (2022-06-29)
HSCOP2 FamilyBromodomain 8084240 4000871 SCOP2 (2022-06-29)
HSCOP2 SuperfamilyBromodomain 8084241 3001843 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ABromodomaine3rcwA1 A: alpha bundlesX: Bromodomain-likeH: Bromodomain (From Topology)T: BromodomainF: BromodomainECOD (1.6)
BBromodomaine3rcwB1 A: alpha bundlesX: Bromodomain-likeH: Bromodomain (From Topology)T: BromodomainF: BromodomainECOD (1.6)
CBromodomaine3rcwC1 A: alpha bundlesX: Bromodomain-likeH: Bromodomain (From Topology)T: BromodomainF: BromodomainECOD (1.6)
DBromodomaine3rcwD1 A: alpha bundlesX: Bromodomain-likeH: Bromodomain (From Topology)T: BromodomainF: BromodomainECOD (1.6)
EBromodomaine3rcwE1 A: alpha bundlesX: Bromodomain-likeH: Bromodomain (From Topology)T: BromodomainF: BromodomainECOD (1.6)
FBromodomaine3rcwF1 A: alpha bundlesX: Bromodomain-likeH: Bromodomain (From Topology)T: BromodomainF: BromodomainECOD (1.6)
GBromodomaine3rcwG1 A: alpha bundlesX: Bromodomain-likeH: Bromodomain (From Topology)T: BromodomainF: BromodomainECOD (1.6)
HBromodomaine3rcwH1 A: alpha bundlesX: Bromodomain-likeH: Bromodomain (From Topology)T: BromodomainF: BromodomainECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00439Bromodomain (Bromodomain)BromodomainBromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with acetylated lysine [3].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Bromodomain-containing protein 1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR001965Zinc finger, PHD-typeDomain
A, B, C, D, E
IPR018359Bromodomain, conserved siteConserved Site
A, B, C, D, E
IPR001487BromodomainDomain
A, B, C, D, E
IPR000313PWWP domainDomain
A, B, C, D, E
IPR042009BRPF2, PHD domainDomain
A, B, C, D, E
IPR019787Zinc finger, PHD-fingerDomain
A, B, C, D, E
IPR011011Zinc finger, FYVE/PHD-typeHomologous Superfamily
A, B, C, D, E
IPR019542Enhancer of polycomb-like, N-terminalDomain
A, B, C, D, E
IPR019786Zinc finger, PHD-type, conserved siteConserved Site
A, B, C, D, E
IPR034732Extended PHD (ePHD) domainDomain
A, B, C, D, E
IPR013083Zinc finger, RING/FYVE/PHD-typeHomologous Superfamily
A, B, C, D, E
IPR036427Bromodomain-like superfamilyHomologous Superfamily
A, B, C, D, E
IPR042004BRPF2, ePHD domainDomain
A, B, C, D, E
IPR050701Histone Modification RegulatorFamily