Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad4fmia_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses Papovaviridae-like VP automated matches (Merkel cell polyomavirus ) [TaxId: 493803 ], SCOPe (2.08)
Bd4fmib_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses Papovaviridae-like VP automated matches (Merkel cell polyomavirus ) [TaxId: 493803 ], SCOPe (2.08)
Cd4fmic_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses Papovaviridae-like VP automated matches (Merkel cell polyomavirus ) [TaxId: 493803 ], SCOPe (2.08)
Dd4fmid_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses Papovaviridae-like VP automated matches (Merkel cell polyomavirus ) [TaxId: 493803 ], SCOPe (2.08)
Ed4fmie_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses Papovaviridae-like VP automated matches (Merkel cell polyomavirus ) [TaxId: 493803 ], SCOPe (2.08)
Fd4fmif_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses Papovaviridae-like VP automated matches (Merkel cell polyomavirus ) [TaxId: 493803 ], SCOPe (2.08)
Gd4fmig_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses Papovaviridae-like VP automated matches (Merkel cell polyomavirus ) [TaxId: 493803 ], SCOPe (2.08)
Hd4fmih_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses Papovaviridae-like VP automated matches (Merkel cell polyomavirus ) [TaxId: 493803 ], SCOPe (2.08)
Id4fmii_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses Papovaviridae-like VP automated matches (Merkel cell polyomavirus ) [TaxId: 493803 ], SCOPe (2.08)
Jd4fmij_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses Papovaviridae-like VP automated matches (Merkel cell polyomavirus ) [TaxId: 493803 ], SCOPe (2.08)
Kd4fmik_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses Papovaviridae-like VP automated matches (Merkel cell polyomavirus ) [TaxId: 493803 ], SCOPe (2.08)
Ld4fmil_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses Papovaviridae-like VP automated matches (Merkel cell polyomavirus ) [TaxId: 493803 ], SCOPe (2.08)
Md4fmim_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses Papovaviridae-like VP automated matches (Merkel cell polyomavirus ) [TaxId: 493803 ], SCOPe (2.08)
Nd4fmin_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses Papovaviridae-like VP automated matches (Merkel cell polyomavirus ) [TaxId: 493803 ], SCOPe (2.08)
Od4fmio_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses Papovaviridae-like VP automated matches (Merkel cell polyomavirus ) [TaxId: 493803 ], SCOPe (2.08)
Pd4fmip_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses Papovaviridae-like VP automated matches (Merkel cell polyomavirus ) [TaxId: 493803 ], SCOPe (2.08)
Qd4fmiq_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses Papovaviridae-like VP automated matches (Merkel cell polyomavirus ) [TaxId: 493803 ], SCOPe (2.08)
Rd4fmir_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses Papovaviridae-like VP automated matches (Merkel cell polyomavirus ) [TaxId: 493803 ], SCOPe (2.08)
Sd4fmis_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses Papovaviridae-like VP automated matches (Merkel cell polyomavirus ) [TaxId: 493803 ], SCOPe (2.08)
Td4fmit_ All beta proteins Nucleoplasmin-like/VP (viral coat and capsid proteins) Group I dsDNA viruses Papovaviridae-like VP automated matches (Merkel cell polyomavirus ) [TaxId: 493803 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyGroup I dsDNA viruses 8081601 3000939 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGroup I dsDNA viruses 8081601 3000939 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyGroup I dsDNA viruses 8081601 3000939 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyGroup I dsDNA viruses 8081601 3000939 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyGroup I dsDNA viruses 8081601 3000939 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyGroup I dsDNA viruses 8081601 3000939 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyGroup I dsDNA viruses 8081601 3000939 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyGroup I dsDNA viruses 8081601 3000939 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyGroup I dsDNA viruses 8081601 3000939 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyGroup I dsDNA viruses 8081601 3000939 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyGroup I dsDNA viruses 8081601 3000939 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyGroup I dsDNA viruses 8081601 3000939 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyGroup I dsDNA viruses 8081601 3000939 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyGroup I dsDNA viruses 8081601 3000939 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyGroup I dsDNA viruses 8081601 3000939 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyGroup I dsDNA viruses 8081601 3000939 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyGroup I dsDNA viruses 8081601 3000939 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyGroup I dsDNA viruses 8081601 3000939 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyGroup I dsDNA viruses 8081601 3000939 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyGroup I dsDNA viruses 8081601 3000939 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APolyoma_coate4fmiA1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
BPolyoma_coate4fmiB1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
CPolyoma_coate4fmiC1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
DPolyoma_coate4fmiD1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
EPolyoma_coate4fmiE1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
FPolyoma_coate4fmiF1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
GPolyoma_coate4fmiG1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
HPolyoma_coate4fmiH1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
IPolyoma_coate4fmiI1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
JPolyoma_coate4fmiJ1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
KPolyoma_coate4fmiK1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
LPolyoma_coate4fmiL1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
MPolyoma_coate4fmiM1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
NPolyoma_coate4fmiN1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
OPolyoma_coate4fmiO1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
PPolyoma_coate4fmiP1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
QPolyoma_coate4fmiQ1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
RPolyoma_coate4fmiR1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
SPolyoma_coate4fmiS1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)
TPolyoma_coate4fmiT1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Polyoma_coatECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
B2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
C2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
D2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
E2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
F2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
G2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
H2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
I2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
J2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
K2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
L2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
M2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
N2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
O2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
P2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
Q2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
R2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
S2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)
T2.60.175.10 Mainly Beta Sandwich Polyomavirus Vp1 Chain ACATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR011222Double-stranded DNA virus, group I, capsidHomologous Superfamily
A, B, C, D, E
IPR000662Capsid protein VP1,PolyomavirusFamily
A, B, C, D, E
IPR036931Polyomavirus capsid protein VP1 superfamilyHomologous Superfamily