Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
A [auth H]d4hcrh_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
D [auth M]d4hcrm_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
B [auth L]d4hcrl2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
B [auth L]d4hcrl1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
E [auth N]d4hcrn2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
E [auth N]d4hcrn1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
C [auth A]d4hcra2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin I set domains automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
C [auth A]d4hcra1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
F [auth B]d4hcrb2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin I set domains automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
F [auth B]d4hcrb1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth A]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054765 3000071 SCOP2B (2022-06-29)
C [auth A]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8055558 3000071 SCOP2B (2022-06-29)
F [auth B]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8055558 3000071 SCOP2B (2022-06-29)
F [auth B]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054765 3000071 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth H]V-set_8e4hcrH1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_8ECOD (1.6)
A [auth H]C1-set_1e4hcrH2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)
D [auth M]V-set_8e4hcrM1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_8ECOD (1.6)
D [auth M]C1-set_1e4hcrM3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)
B [auth L]C1-set_4e4hcrL2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_4ECOD (1.6)
B [auth L]V-sete4hcrL1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-setECOD (1.6)
E [auth N]C1-set_4e4hcrN2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_4ECOD (1.6)
E [auth N]V-sete4hcrN1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-setECOD (1.6)
C [auth A]Adhes-Ig_likee4hcrA2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Adhes-Ig_likeECOD (1.6)
C [auth A]ICAM_Ne4hcrA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: ICAM_NECOD (1.6)
F [auth B]Adhes-Ig_likee4hcrB2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Adhes-Ig_likeECOD (1.6)
F [auth B]ICAM_Ne4hcrB1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: ICAM_NECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
A [auth H],
D [auth M]
PF-547659 VH-CH1 Homo sapiens (human) IGHV1-18*01, IGHJ6*01, IGHJ6*02, IGHG2*01, IGHG2*06, IGHG2*05, IGHG2*03 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-2_KAPPA IMGT (202450-0)
B [auth L],
E [auth N]
PF-547659 L-KAPPA Homo sapiens (human) IGKV2D-29*01, IGKJ1*01, IGKC*01 V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA IG FAB-GAMMA-2_KAPPA IMGT (202450-0)
C [auth A],
F [auth B]
MAdCAM-1 (Mucosal addressin cell adhesion molecule 1) 2C-LIKE Homo sapiens (human) MADCAM1*01 C-LIKE-DOMAIN C-LIKE RPI MADCAM1 IMGT (202450-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
A [auth H],
D [auth M]
Heavy ChainIGHV1 -mucosal addressin cell adhesion molecule 1SAbDab (2024-12-20)
B [auth L],
E [auth N]
Light ChainIGKV2D Kappamucosal addressin cell adhesion molecule 1SAbDab (2024-12-20)

Thera-SAbDab Antibody Annotation Thera-SAbDab Database Homepage

ChainNameTargetProvenance Source
A [auth H],
D [auth M]
Ontamalimab MADCAM1Therapeutic SAbDab (2024-12-20)
B [auth L],
E [auth N]
Ontamalimab MADCAM1Therapeutic SAbDab (2024-12-20)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth A],
F [auth B]
PF09085Adhesion molecule, immunoglobulin-like (Adhes-Ig_like)Adhesion molecule, immunoglobulin-likeMembers of this family are found in a set of mucosal cellular adhesion proteins and adopt an immunoglobulin-like beta-sandwich structure, with seven strands arranged in two beta-sheets in a Greek-key topology. They are essential for recruitment of ly ...Members of this family are found in a set of mucosal cellular adhesion proteins and adopt an immunoglobulin-like beta-sandwich structure, with seven strands arranged in two beta-sheets in a Greek-key topology. They are essential for recruitment of lymphocytes to specific tissues [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth H],
D [auth M]
PF-547659 heavy chain---
B [auth L],
E [auth N]
PF-547659 light chain---
C [auth A],
F [auth B]
Mucosal addressin cell adhesion molecule 1

Pharos: Disease Associations Pharos Homepage Annotation