Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad5gzna2 All beta proteins Immunoglobulin-like beta-sandwich E set domains automated matches automated matches ZIKV (Zika virus ) [TaxId: 64320 ], SCOPe (2.08)
Ad5gzna1 Membrane and cell surface proteins and peptides Viral glycoprotein, central and dimerisation domains Viral glycoprotein, central and dimerisation domains automated matches automated matches ZIKV (Zika virus ) [TaxId: 64320 ], SCOPe (2.08)
D [auth B]d5gznb2 All beta proteins Immunoglobulin-like beta-sandwich E set domains automated matches automated matches ZIKV (Zika virus ) [TaxId: 64320 ], SCOPe (2.08)
D [auth B]d5gznb1 Membrane and cell surface proteins and peptides Viral glycoprotein, central and dimerisation domains Viral glycoprotein, central and dimerisation domains automated matches automated matches ZIKV (Zika virus ) [TaxId: 64320 ], SCOPe (2.08)
B [auth H]d5gznh_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
E [auth C]d5gznc_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
C [auth L]d5gznl2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
C [auth L]d5gznl1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
F [auth D]d5gznd2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
F [auth D]d5gznd1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AFlavi_glycop_Ce5gznA2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Flavi_glycop_CECOD (1.6)
AFlavi_glycoprote5gznA1 A: beta complex topologyX: Viral glycoprotein, central and dimerisation domains-likeH: Viral glycoprotein, central and dimerisation domains (From Topology)T: Viral glycoprotein, central and dimerisation domainsF: Flavi_glycoprotECOD (1.6)
D [auth B]Flavi_glycop_Ce5gznB1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Flavi_glycop_CECOD (1.6)
D [auth B]Flavi_glycoprote5gznB2 A: beta complex topologyX: Viral glycoprotein, central and dimerisation domains-likeH: Viral glycoprotein, central and dimerisation domains (From Topology)T: Viral glycoprotein, central and dimerisation domainsF: Flavi_glycoprotECOD (1.6)
G [auth E]Flavi_glycoprote5gznE1 A: beta complex topologyX: Viral glycoprotein, central and dimerisation domains-likeH: Viral glycoprotein, central and dimerisation domains (From Topology)T: Viral glycoprotein, central and dimerisation domainsF: Flavi_glycoprotECOD (1.6)
H [auth G]Flavi_glycoprote5gznG1 A: beta complex topologyX: Viral glycoprotein, central and dimerisation domains-likeH: Viral glycoprotein, central and dimerisation domains (From Topology)T: Viral glycoprotein, central and dimerisation domainsF: Flavi_glycoprotECOD (1.6)
B [auth H]C1-set_1e5gznH1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)
B [auth H]V-set_12e5gznH2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_12ECOD (1.6)
E [auth C]C1-set_1e5gznC2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)
E [auth C]V-set_12e5gznC1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_12ECOD (1.6)
C [auth L]C1-sete5gznL2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-setECOD (1.6)
C [auth L]V-set_3e5gznL1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_3ECOD (1.6)
F [auth D]C1-sete5gznD1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-setECOD (1.6)
F [auth D]V-set_3e5gznD2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_3ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
B [auth H],
E [auth C]
Antibody Fab Fragment, neutralizing antibody VH-CH1 Homo sapiens (human) IGHV3-30*01, IGHV3-30*04, IGHV3-30*07, IGHV3-30*11, IGHV3-30*14, IGHV3-30*16, IGHV3-30*17, IGHV3-30-3*01, IGHV3-30-3*03, IGHJ4*01, IGHJ4*02, IGHJ4*03, IGHG1*03, IGHG1*08, IGHG1*06 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-1_LAMBDA IMGT (202447-0)
C [auth L],
F [auth D]
Antibody Fab Fragment, neutralizing antibody L-LAMBDA Homo sapiens (human) IGLV1-51*01, IGLJ3*02, IGLC2*01, IGLC2*02, IGLC3*04 V-DOMAIN V-LAMBDA, C-DOMAIN C-LAMBDA IG FAB-GAMMA-1_LAMBDA IMGT (202447-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B [auth H],
E [auth C]
Heavy ChainIGHV3 -genome polyprotein | genome polyproteinSAbDab (2024-11-29)
C [auth L],
F [auth D]
Light ChainIGLV1 Lambdagenome polyprotein | genome polyproteinSAbDab (2024-11-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
D [auth B],
G [auth E],
H [auth G]
PF00869Flavivirus glycoprotein, central and dimerisation domains (Flavi_glycoprot)Flavivirus glycoprotein, central and dimerisation domains- Domain
A,
D [auth B],
G [auth E],
H [auth G]
PF02832Flavivirus glycoprotein, immunoglobulin-like domain (Flavi_glycop_C)Flavivirus glycoprotein, immunoglobulin-like domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
D [auth B],
G [auth E],
H [auth G]
Genome polyprotein
B [auth H],
E [auth C]
Antibody Heavy chain---
C [auth L],
F [auth D]
Antibody light chain---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
D [auth B],
G [auth E],
H [auth G]
IPR000208RNA-directed RNA polymerase, fingers/palm subdomains, flavivirusDomain
A,
D [auth B],
G [auth E],
H [auth G]
IPR014756Immunoglobulin E-setHomologous Superfamily
A,
D [auth B],
G [auth E],
H [auth G]
IPR001122Capsid protein C, flavivirusDomain
A,
D [auth B],
G [auth E],
H [auth G]
IPR027287Glycoprotein E, immunoglobulin-like domain, flavivirusDomain
A,
D [auth B],
G [auth E],
H [auth G]
IPR014412Genome polyprotein, FlavivirusFamily
A,
D [auth B],
G [auth E],
H [auth G]
IPR036253Flavivirus glycoprotein, central and dimerisation domain superfamilyHomologous Superfamily
A,
D [auth B],
G [auth E],
H [auth G]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A,
D [auth B],
G [auth E],
H [auth G]
IPR026490mRNA cap 0/1 methyltransferaseDomain
A,
D [auth B],
G [auth E],
H [auth G]
IPR009003Peptidase S1, PA clanHomologous Superfamily
A,
D [auth B],
G [auth E],
H [auth G]
IPR001650Helicase, C-terminal domain-likeDomain
A,
D [auth B],
G [auth E],
H [auth G]
IPR014001Helicase superfamily 1/2, ATP-binding domainDomain
A,
D [auth B],
G [auth E],
H [auth G]
IPR013755Flaviviral glycoprotein E, central domain, subdomain 1Homologous Superfamily
A,
D [auth B],
G [auth E],
H [auth G]
IPR000752Flavivirus non-structural protein NS2ADomain
A,
D [auth B],
G [auth E],
H [auth G]
IPR047530RNA-dependent RNA polymerase, flavivirusDomain
A,
D [auth B],
G [auth E],
H [auth G]
IPR049486Flavivridae NS3 helicase, C-terminal helical domainDomain
A,
D [auth B],
G [auth E],
H [auth G]
IPR046811RNA-directed RNA polymerase, thumb subdomain, flavivirusDomain
A,
D [auth B],
G [auth E],
H [auth G]
IPR038055Flaviviral glycoprotein E, dimerisation domainHomologous Superfamily
A,
D [auth B],
G [auth E],
H [auth G]
IPR002877Ribosomal RNA methyltransferase, FtsJ domainDomain
A,
D [auth B],
G [auth E],
H [auth G]
IPR038302Envelope glycoprotein M superfamily, flavivirusHomologous Superfamily
A,
D [auth B],
G [auth E],
H [auth G]
IPR000069Envelope glycoprotein M, flavivirusDomain
A,
D [auth B],
G [auth E],
H [auth G]
IPR011492Non-structural protein NS3-like, DEAD box helicase, flavivirusDomain
A,
D [auth B],
G [auth E],
H [auth G]
IPR038345Flavivirus envelope glycoprotein E, Stem/Anchor domain superfamilyHomologous Superfamily
A,
D [auth B],
G [auth E],
H [auth G]
IPR038688Flavivirus polyprotein propeptide superfamilyHomologous Superfamily
A,
D [auth B],
G [auth E],
H [auth G]
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyHomologous Superfamily
A,
D [auth B],
G [auth E],
H [auth G]
IPR026470Flavivirus envelope glycoprotein E, Stem/Anchor domainDomain
A,
D [auth B],
G [auth E],
H [auth G]
IPR011998Envelope glycoprotein E, central and dimerisation domain, flavivirusDomain
A,
D [auth B],
G [auth E],
H [auth G]
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
A,
D [auth B],
G [auth E],
H [auth G]
IPR037172Flavivirus capsid protein C superfamilyHomologous Superfamily
A,
D [auth B],
G [auth E],
H [auth G]
IPR000404Flavivirus non-structural protein NS4ADomain
A,
D [auth B],
G [auth E],
H [auth G]
IPR000487Non-structural protein NS2B, flavivirusDomain
A,
D [auth B],
G [auth E],
H [auth G]
IPR001528Flavivirus non-structural protein NS4BDomain
A,
D [auth B],
G [auth E],
H [auth G]
IPR001157Non-structural protein NS1, flavivirusDomain
A,
D [auth B],
G [auth E],
H [auth G]
IPR013756Flaviviral glycoprotein E, central domain, subdomain 2Homologous Superfamily
A,
D [auth B],
G [auth E],
H [auth G]
IPR001850Non-structural protein NS3, peptidase S7, flavivirusDomain
A,
D [auth B],
G [auth E],
H [auth G]
IPR000336Flavivirus/Alphavirus glycoprotein, immunoglobulin-like domain superfamilyHomologous Superfamily
A,
D [auth B],
G [auth E],
H [auth G]
IPR002535Flavivirus polyprotein propeptideDomain
A,
D [auth B],
G [auth E],
H [auth G]
IPR007094RNA-directed RNA polymerase, catalytic domainDomain