5KH5
Crystal Structure of Steptococcus pneumoniae Undecaprenyl pyrophosphate Synthase (UPPS) IN COMPLEX WITH ~{N}-(3-azanyl-3-oxidanylidene-propyl)-5-(1-benzothiophen-5-yl)-1-(phenylmethyl)-~{N}-[(4-propan-2-yloxyphenyl)methyl]pyrazole-4-carboxamide
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5kh5a_ | Alpha and beta proteins (a/b) | Undecaprenyl diphosphate synthase | Undecaprenyl diphosphate synthase | automated matches | automated matches | (Streptococcus pneumoniae TIGR4 ) [TaxId: 170187 ], | SCOPe (2.08) |
B | d5kh5b_ | Alpha and beta proteins (a/b) | Undecaprenyl diphosphate synthase | Undecaprenyl diphosphate synthase | automated matches | automated matches | (Streptococcus pneumoniae TIGR4 ) [TaxId: 170187 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Prenyltransf | e5kh5A1 | A: a/b three-layered sandwiches | X: Undecaprenyl diphosphate synthase (From Topology) | H: Undecaprenyl diphosphate synthase (From Topology) | T: Undecaprenyl diphosphate synthase | F: Prenyltransf | ECOD (1.6) |
B | Prenyltransf | e5kh5B1 | A: a/b three-layered sandwiches | X: Undecaprenyl diphosphate synthase (From Topology) | H: Undecaprenyl diphosphate synthase (From Topology) | T: Undecaprenyl diphosphate synthase | F: Prenyltransf | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.1180.10 | Alpha Beta | 3-Layer(aba) Sandwich | Undecaprenyl pyrophosphate synthetase | Decaprenyl diphosphate synthase-like | CATH (4.3.0) |
B | 3.40.1180.10 | Alpha Beta | 3-Layer(aba) Sandwich | Undecaprenyl pyrophosphate synthetase | Decaprenyl diphosphate synthase-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01255 | Putative undecaprenyl diphosphate synthase (Prenyltransf) | Putative undecaprenyl diphosphate synthase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR018520 | Di-trans-poly-cis-decaprenylcistransferase-like, conserved site | Conserved Site | |
IPR036424 | Decaprenyl diphosphate synthase-like superfamily | Homologous Superfamily | |
IPR001441 | Decaprenyl diphosphate synthase-like | Family |