5L3Q
Structure of the GTPase heterodimer of human SRP54 and SRalpha
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | SRP54_N | e5l3qA1 | A: alpha bundles | X: Domain of the SRP/SRP receptor G proteins-like | H: Domain of the SRP/SRP receptor G-proteins (From Topology) | T: Domain of the SRP/SRP receptor G-proteins | F: SRP54_N | ECOD (1.6) |
A | SRP54 | e5l3qA2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: SRP54 | ECOD (1.6) |
C | SRP54_N | e5l3qC2 | A: alpha bundles | X: Domain of the SRP/SRP receptor G proteins-like | H: Domain of the SRP/SRP receptor G-proteins (From Topology) | T: Domain of the SRP/SRP receptor G-proteins | F: SRP54_N | ECOD (1.6) |
C | SRP54 | e5l3qC1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: SRP54 | ECOD (1.6) |
B | SRP54_N | e5l3qB2 | A: alpha bundles | X: Domain of the SRP/SRP receptor G proteins-like | H: Domain of the SRP/SRP receptor G-proteins (From Topology) | T: Domain of the SRP/SRP receptor G-proteins | F: SRP54_N | ECOD (1.6) |
B | SRP54 | e5l3qB1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: SRP54 | ECOD (1.6) |
D | SRP54_N | e5l3qD1 | A: alpha bundles | X: Domain of the SRP/SRP receptor G proteins-like | H: Domain of the SRP/SRP receptor G-proteins (From Topology) | T: Domain of the SRP/SRP receptor G-proteins | F: SRP54_N | ECOD (1.6) |
D | SRP54 | e5l3qD2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: SRP54 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.120.140 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | SRP54, nucleotide-binding domain | CATH (4.3.0) |
A | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
C | 1.20.120.140 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | SRP54, nucleotide-binding domain | CATH (4.3.0) |
C | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
B | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
D | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00448 | SRP54-type protein, GTPase domain (SRP54) | SRP54-type protein, GTPase domain | This family includes relatives of the G-domain of the SRP54 family of proteins. | Domain | |
PF00448 | SRP54-type protein, GTPase domain (SRP54) | SRP54-type protein, GTPase domain | This family includes relatives of the G-domain of the SRP54 family of proteins. | Domain |