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Data API
6GD6
Cytochrome c in complex with Sulfonato-calix[8]arene, H3 form with ammonium sulfate
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Domain Annotation: SCOP/SCOPe Classification
SCOP-e Database Homepage
Chains
Domain Info
Class
Fold
Superfamily
Family
Domain
Species
Provenance Source (Version)
A
d6gd6a1
All alpha proteins
Cytochrome c
Cytochrome c
monodomain cytochrome c
Mitochondrial cytochrome c
(
Saccharomyces cerevisiae S288C
) [TaxId:
559292
],
SCOPe (2.08)
A
d6gd6a2
Artifacts
Tags
Tags
Tags
N-terminal Tags
(
Saccharomyces cerevisiae S288C
) [TaxId:
559292
],
SCOPe (2.08)
Domain Annotation: SCOP2 Classification
SCOP2 Database Homepage
Chains
Type
Family Name
Domain Identifier
Family Identifier
Provenance Source (Version)
A
SCOP2B Superfamily
Cytochrome c
8036427
3000815
SCOP2B (2022-06-29)
Domain Annotation: ECOD Classification
ECOD Database Homepage
Chains
Family Name
Domain Identifier
Architecture
Possible Homology
Homology
Topology
Family
Provenance Source (Version)
A
Cytochrom_C_1
e6gd6A1
A: alpha arrays
X: Cytochrome c-like
H: Cytochrome c (From Topology)
T: Cytochrome c
F: Cytochrom_C_1
ECOD (1.6)
Protein Family Annotation
Pfam Database Homepage
Chains
Accession
Name
Description
Comments
Source
A
PF00034
Cytochrome c (Cytochrom_C)
Cytochrome c
The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, Pfam:PF06181, has now been merged into this family.
Domain
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
Cytochrome c iso-1
ion binding
binding
anion binding
phosphatidylglycerol binding
phospholipid binding
lipid binding
cardiolipin binding
small molecule binding
organic cyclic compound binding
tetrapyrrole binding
heme binding
electron transfer activity
cation binding
metal ion binding
aerobic respiration
cellular respiration
aerobic electron transport chain
oxidative phosphorylation
energy derivation by oxidation of organic compounds
cellular metabolic process
ATP synthesis coupled electron transport
electron transport chain
generation of precursor metabolites and energy
mitochondrial electron transport, cytochrome c to oxygen
respiratory electron transport chain
metabolic process
cellular process
mitochondrial ATP synthesis coupled electron transport
aerobic respiration
cellular respiration
aerobic electron transport chain
oxidative phosphorylation
energy derivation by oxidation of organic compounds
cellular metabolic process
ATP synthesis coupled electron transport
electron transport chain
generation of precursor metabolites and energy
mitochondrial electron transport, cytochrome c to oxygen
respiratory electron transport chain
metabolic process
cellular process
mitochondrial ATP synthesis coupled electron transport
mitochondrial electron transport, ubiquinol to cytochrome c
Less
membrane-bounded organelle
intracellular organelle
intracellular anatomical structure
mitochondrion
organelle
cytoplasm
cellular anatomical entity
intracellular membrane-bounded organelle
mitochondrial intermembrane space
membrane-enclosed lumen
intracellular organelle lumen
organelle envelope lumen
organelle envelope
organelle lumen
membrane-bounded organelle
intracellular organelle
intracellular anatomical structure
mitochondrion
organelle
cytoplasm
cellular anatomical entity
intracellular membrane-bounded organelle
mitochondrial intermembrane space
membrane-enclosed lumen
intracellular organelle lumen
organelle envelope lumen
organelle envelope
organelle lumen
mitochondrial envelope
Less
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A
IPR036909
Cytochrome c-like domain superfamily
Homologous Superfamily
A
IPR009056
Cytochrome c-like domain
Domain
A
IPR002327
Cytochrome c, class IA/ IB
Family
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