Universal RVD R* accommodates cytosine via water-mediated interactions
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | TAL_effector | e6jw0A1 | A: alpha superhelices | X: Mitochondrial mTERF-like | H: Transcription activator-like effector (TALE) (From Topology) | T: Transcription activator-like effector (TALE) | F: TAL_effector | ECOD (1.6) |
D [auth B] | TAL_effector | e6jw0B1 | A: alpha superhelices | X: Mitochondrial mTERF-like | H: Transcription activator-like effector (TALE) (From Topology) | T: Transcription activator-like effector (TALE) | F: TAL_effector | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, D [auth B] | PF03377 | TAL effector repeat (TAL_effector) | TAL effector repeat | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, D [auth B] | TAL effector | - | - | |
B [auth I], E [auth C] | DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*CP*GP*CP*GP*TP*CP*TP*CP*T)-3') | - | - | - |
C [auth J], F [auth D] | DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3') | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, D [auth B] | IPR053450 | Transcription activator-like effector protein | Family |
A, D [auth B] | IPR005042 | TAL effector repeat | Repeat |