7S6E

Crystal structure of UrtA from Synechococcus CC9311 in complex with urea and calcium

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APeripla_BP_6e7s6eA2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Periplasmic binding protein-like IF: Peripla_BP_6ECOD (1.6)
APeripla_BP_5e7s6eA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Periplasmic binding protein-like IF: Peripla_BP_5ECOD (1.6)
BPeripla_BP_6e7s6eB2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Periplasmic binding protein-like IF: Peripla_BP_6ECOD (1.6)
BPeripla_BP_5e7s6eB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Periplasmic binding protein-like IF: Peripla_BP_5ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (utative)
B3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF13433Periplasmic binding protein domain (Peripla_BP_5)Periplasmic binding protein domainThis domain is found in a variety of bacterial periplasmic binding proteins.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Urea ABC transporter, periplasmic urea-binding protein - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR028082Periplasmic binding protein-like IHomologous Superfamily
A, B
IPR017777Urea ABC transporter, substrate-binding protein UrtA-likeFamily