7TRA

Cascade complex from type I-A CRISPR-Cas system


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
G [auth J]SCOP2B SuperfamilyCRISPR-associated proteins8052193 3001554 SCOP2B (2022-06-29)
E [auth H]SCOP2B SuperfamilyCRISPR-associated proteins8052193 3001554 SCOP2B (2022-06-29)
F [auth I]SCOP2B SuperfamilyCRISPR-associated proteins8052193 3001554 SCOP2B (2022-06-29)
H [auth K]SCOP2B SuperfamilyCRISPR-associated proteins8052193 3001554 SCOP2B (2022-06-29)
Q [auth L]SCOP2B SuperfamilyCRISPR-associated proteins8052193 3001554 SCOP2B (2022-06-29)
R [auth M]SCOP2B SuperfamilyCRISPR-associated proteins8052193 3001554 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
S [auth N]DevRe7traN1 A: a+b two layersX: Alpha-beta plaitsH: Cas7-relatedT: CRISPR-associated protein Cas7/Csa2-relatedF: DevRECOD (1.6)
J [auth Q]cas3_yersinia_1ste7traQ1 A: alpha complex topologyX: PDEase-likeH: HD-domain/PDEase-like (From Topology)T: HD-domain/PDEase-likeF: cas3_yersinia_1stECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00270DEAD/DEAH box helicase (DEAD)DEAD/DEAH box helicaseMembers of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome ...Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.
Domain
PF00271Helicase conserved C-terminal domain (Helicase_C)Helicase conserved C-terminal domainThe Prosite family is restricted to DEAD/H helicases, whereas this domain family is found in a wide variety of helicases and helicase related proteins. It may be that this is not an autonomously folding unit, but an integral part of the helicase.Domain
PF09703CRISPR-associated protein (Cas_Csa4) (Cas_Csa4)CRISPR-associated protein (Cas_Csa4)- Family
PF01905CRISPR-associated negative auto-regulator DevR/Csa2 (DevR)CRISPR-associated negative auto-regulator DevR/Csa2- Family
J [auth Q]PF18019Cas3, HD domain (Cas3_HD)Cas3, HD domainThis HD domain is found at the N-terminus of Cas3 enzymes fused to a helicase domain. This domain is sometimes found as a separate protein. It acts as a nuclease that cleaves ssDNA.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
CRISPR-associated helicase Cas3 -
Cas8a- - -
C,
D,
N [auth E],
O [auth F],
P [auth G]
Cas11a- - -
Cas7a- -
I [auth O]Cas5a- -
J [auth Q]CRISPR-associated endonuclease Cas3-HD -
K [auth R]crRNA (44-MER)---
L [auth S]Target strand DNA (44-MER)---
M [auth T]Non-Target strand DNA (25-MER)---