7W0T

TRIM7 in complex with C-terminal peptide of 2C

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A [auth F]	SCOP2B Superfamily	Concanavalin A-like lectins/glucanases	8102923	3000120	SCOP2B (2022-06-29)
C [auth B]	SCOP2B Superfamily	Concanavalin A-like lectins/glucanases	8102923	3000120	SCOP2B (2022-06-29)
B [auth C]	SCOP2B Superfamily	Concanavalin A-like lectins/glucanases	8102923	3000120	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth F]	PF00622,PF13765	e7w0tF1	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Concanavalin A-like lectins/glucanases	F: PF00622,PF13765	ECOD (1.6)
C [auth B]	PF00622,PF13765	e7w0tB1	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Concanavalin A-like lectins/glucanases	F: PF00622,PF13765	ECOD (1.6)
B [auth C]	PF00622,PF13765	e7w0tC1	A: beta sandwiches	X: jelly-roll	H: Concanavalin A-like	T: Concanavalin A-like lectins/glucanases	F: PF00622,PF13765	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth F], B [auth C], C [auth B]	PF00622	SPRY domain (SPRY)	SPRY domain	-	Family
A [auth F], B [auth C], C [auth B]	PF13765	SPRY-associated domain (PRY)	SPRY-associated domain	-	Family
D [auth A], E [auth D], F [auth E]	PF08727	Poliovirus 3A protein like (P3A)	Poliovirus 3A protein like	This domain is found in positive-strand RNA viruses. The 3A protein is a critical component of the poliovirus replication complex, and is also an inhibitor of host cell ER to Golgi transport.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth F], B [auth C], C [auth B]	E3 ubiquitin-protein ligase TRIM7	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity ubiquitin-like protein ligase activity ubiquitin protein ligase activity transferase activity cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity ubiquitin-like protein ligase activity ubiquitin protein ligase activity transferase activity catalytic activity ubiquitin-protein transferase activity	biological process involved in interspecies interaction between organisms response to stimulus immune response response to other organism defense response defense response to symbiont response to external stimulus response to biotic stimulus defense response to virus immune system process defense response to other organism response to stress innate immune response antiviral innate immune response biological process involved in interspecies interaction between organisms response to stimulus immune response response to other organism defense response defense response to symbiont response to external stimulus response to biotic stimulus defense response to virus immune system process defense response to other organism response to stress innate immune response antiviral innate immune response response to external biotic stimulus response to virus organonitrogen compound metabolic process primary metabolic process organic substance metabolic process protein ubiquitination macromolecule modification metabolic process protein metabolic process macromolecule metabolic process post-translational protein modification protein modification process protein modification by small protein conjugation protein modification by small protein conjugation or removal	membrane-bounded organelle intracellular organelle intracellular anatomical structure Golgi apparatus organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle endomembrane system nucleus
D [auth A], E [auth D], F [auth E]	peptide	passive transmembrane transporter activity monoatomic ion channel activity channel activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding passive transmembrane transporter activity monoatomic ion channel activity channel activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid helicase activity RNA helicase activity ATP-dependent activity, acting on RNA catalytic activity ATP-dependent activity cation binding metal ion binding 5'-3' RNA polymerase activity RNA polymerase activity transferase activity RNA-dependent RNA polymerase activity nucleotidyltransferase activity transferase activity, transferring phosphorus-containing groups cysteine-type peptidase activity peptidase activity catalytic activity, acting on a protein cysteine-type endopeptidase activity hydrolase activity endopeptidase activity RNA binding nucleic acid binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity, acting on acid anhydrides structural molecule activity	cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly cellular process cellular component organization or biogenesis cellular biosynthetic process cellular metabolic process RNA metabolic process viral life cycle primary metabolic process nucleobase-containing compound biosynthetic process cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly cellular process cellular component organization or biogenesis cellular biosynthetic process cellular metabolic process RNA metabolic process viral life cycle primary metabolic process nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process nucleic acid biosynthetic process organic substance metabolic process viral genome replication biosynthetic process viral RNA genome replication organic cyclic compound biosynthetic process viral process organic substance biosynthetic process metabolic process macromolecule metabolic process symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of RIG-I activity symbiont-mediated perturbation of host cellular process biological process involved in interspecies interaction between organisms response to stimulus symbiont-mediated suppression of host pathogen-associated molecular pattern receptor signaling pathway response to biotic stimulus biological process involved in symbiotic interaction symbiont-mediated suppression of host immune response symbiont-mediated suppression of host innate immune response response to host immune response symbiont-mediated suppression of host defenses symbiont-mediated perturbation of host innate immune response response to host response to external biotic stimulus symbiont-mediated perturbation of host signal transduction pathway modulation of process of another organism symbiont-mediated perturbation of host defense response response to host defenses response to other organism symbiont-mediated perturbation of host immune response response to defenses of other organism symbiont-mediated perturbation of host defenses response to external stimulus biological process involved in interaction with host symbiont-mediated suppression of host signal transduction pathway modulation by symbiont of host process symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway gene expression DNA-templated transcription symbiont-mediated disruption of host anatomical structure symbiont-mediated perturbation of host membrane symbiont genome entry into host cell via pore formation in plasma membrane symbiont-mediated disruption of host cellular anatomical entity symbiont entry into host cell symbiont entry into host disruption of anatomical structure in another organism catabolic process regulation of cellular process autophagy positive regulation of biological process modulation by virus of host process positive regulation of cellular metabolic process regulation of autophagy cellular catabolic process positive regulation of metabolic process induction by virus of host autophagy process utilizing autophagic mechanism positive regulation of cellular process modulation by virus of host cellular process positive regulation of autophagy regulation of biological process modulation by virus of host autophagy biological regulation regulation of cellular metabolic process regulation of catabolic process symbiont-mediated perturbation of host autophagy positive regulation of catabolic process regulation of cellular catabolic process positive regulation of cellular catabolic process regulation of metabolic process symbiont-mediated suppression of host mRNA export from nucleus symbiont-mediated suppression of host gene expression symbiont-mediated perturbation of host gene expression DNA replication DNA metabolic process symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of MDA-5 activity symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of MAVS activity virion attachment to host cell adhesion of symbiont to host cell adhesion of symbiont to host import into cell transport establishment of localization vesicle-mediated transport localization endocytosis involved in viral entry into host cell endocytosis transport of virus organonitrogen compound metabolic process proteolysis protein metabolic process	membrane cellular anatomical entity viral capsid icosahedral viral capsid virion component T=pseudo3 icosahedral viral capsid host intracellular membrane-bounded organelle host cellular component host intracellular part host cell membrane host cell cytoplasmic vesicle membrane host cell cytoplasm part host intracellular organelle host cell cytoplasmic vesicle membrane cellular anatomical entity viral capsid icosahedral viral capsid virion component T=pseudo3 icosahedral viral capsid host intracellular membrane-bounded organelle host cellular component host intracellular part host cell membrane host cell cytoplasmic vesicle membrane host cell cytoplasm part host intracellular organelle host cell cytoplasmic vesicle host cell cytoplasm host cell part host intracellular region host cell nucleus

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth F], B [auth C], C [auth B]	IPR017907	Zinc finger, RING-type, conserved site	Conserved Site
A [auth F], B [auth C], C [auth B]	IPR000315	B-box-type zinc finger	Domain
A [auth F], B [auth C], C [auth B]	IPR001870	B30.2/SPRY domain	Domain
A [auth F], B [auth C], C [auth B]	IPR006574	SPRY-associated	Domain
A [auth F], B [auth C], C [auth B]	IPR013083	Zinc finger, RING/FYVE/PHD-type	Homologous Superfamily
A [auth F], B [auth C], C [auth B]	IPR003879	Butyrophylin-like, SPRY domain	Domain
A [auth F], B [auth C], C [auth B]	IPR013320	Concanavalin A-like lectin/glucanase domain superfamily	Homologous Superfamily
A [auth F], B [auth C], C [auth B]	IPR020457	Zinc finger, B-box, chordata	Domain
A [auth F], B [auth C], C [auth B]	IPR043136	B30.2/SPRY domain superfamily	Homologous Superfamily
A [auth F], B [auth C], C [auth B]	IPR001841	Zinc finger, RING-type	Domain
A [auth F], B [auth C], C [auth B]	IPR003877	SPRY domain	Domain
D [auth A], E [auth D], F [auth E]	IPR002527	Picornavirus 2B protein	Domain
D [auth A], E [auth D], F [auth E]	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	Homologous Superfamily
D [auth A], E [auth D], F [auth E]	IPR000199	Peptidase C3A/C3B, picornaviral	Domain
D [auth A], E [auth D], F [auth E]	IPR001676	Picornavirus capsid	Domain
D [auth A], E [auth D], F [auth E]	IPR014759	Helicase, superfamily 3, single-stranded RNA virus	Domain
D [auth A], E [auth D], F [auth E]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
D [auth A], E [auth D], F [auth E]	IPR000081	Peptidase C3, picornavirus core protein 2A	Domain
D [auth A], E [auth D], F [auth E]	IPR029053	Viral coat protein subunit	Homologous Superfamily
D [auth A], E [auth D], F [auth E]	IPR009003	Peptidase S1, PA clan	Homologous Superfamily
D [auth A], E [auth D], F [auth E]	IPR033703	Picornavirus/Calicivirus coat protein	Domain
D [auth A], E [auth D], F [auth E]	IPR036203	Poliovirus core protein 3a, soluble domain	Homologous Superfamily
D [auth A], E [auth D], F [auth E]	IPR001205	RNA-directed RNA polymerase, C-terminal domain	Domain
D [auth A], E [auth D], F [auth E]	IPR036988	Picornavirus coat protein VP4 superfamily	Homologous Superfamily
D [auth A], E [auth D], F [auth E]	IPR003593	AAA+ ATPase domain	Domain
D [auth A], E [auth D], F [auth E]	IPR003138	Picornavirus coat protein VP4	Family
D [auth A], E [auth D], F [auth E]	IPR043502	DNA/RNA polymerase superfamily	Homologous Superfamily
D [auth A], E [auth D], F [auth E]	IPR044067	Picornavirales 3C/3C-like protease domain	Domain
D [auth A], E [auth D], F [auth E]	IPR014838	Poliovirus 3A protein-like	Domain
D [auth A], E [auth D], F [auth E]	IPR043504	Peptidase S1, PA clan, chymotrypsin-like fold	Homologous Superfamily
D [auth A], E [auth D], F [auth E]	IPR007094	RNA-directed RNA polymerase, catalytic domain	Domain
D [auth A], E [auth D], F [auth E]	IPR000605	Helicase, superfamily 3, single-stranded DNA/RNA virus	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A [auth F], B [auth C], C [auth B]	Pharos: Q9C029	nasopharyngeal carcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia tuberculosis osteosarcoma pituitary cancer ulcerative colitis pancreatic intraductal papillary-mucinous neoplasm psoriasis