# 8GXU

#### 1 ATP-bound V1EG of V/A-ATPase from Thermus thermophilus

#### Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|

A | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018285 | 3002019 | SCOP2B (2022-06-29) |

A | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056935 | 3000684 | SCOP2B (2022-06-29) |

A | SCOP2B Superfamily | Single hybrid motif | 8018293 | 3001880 | SCOP2B (2022-06-29) |

A | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018290 | 3001034 | SCOP2B (2022-06-29) |

B | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018285 | 3002019 | SCOP2B (2022-06-29) |

B | SCOP2B Superfamily | Single hybrid motif | 8018293 | 3001880 | SCOP2B (2022-06-29) |

B | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018290 | 3001034 | SCOP2B (2022-06-29) |

B | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056935 | 3000684 | SCOP2B (2022-06-29) |

C | SCOP2B Superfamily | Single hybrid motif | 8018293 | 3001880 | SCOP2B (2022-06-29) |

C | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018285 | 3002019 | SCOP2B (2022-06-29) |

C | SCOP2B Superfamily | ATP synthase alpha/beta C-terminal domain-like | 8056935 | 3000684 | SCOP2B (2022-06-29) |

C | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018290 | 3001034 | SCOP2B (2022-06-29) |

D | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018301 | 3002019 | SCOP2B (2022-06-29) |

D | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018298 | 3001034 | SCOP2B (2022-06-29) |

E | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018301 | 3002019 | SCOP2B (2022-06-29) |

E | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018298 | 3001034 | SCOP2B (2022-06-29) |

F | SCOP2B Superfamily | RecA-like P-loop NTPases | 8018301 | 3002019 | SCOP2B (2022-06-29) |

F | SCOP2B Superfamily | ATP synthase alpha/beta N-terminal domain-like | 8018298 | 3001034 | SCOP2B (2022-06-29) |

H | SCOP2B Superfamily | AtpF-like | 8033711 | 3000828 | SCOP2B (2022-06-29) |

#### Domain Annotation: ECOD Classification ECOD Database Homepage

Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|

A | ATP-synt_ab_N | e8gxuA2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: ATP-synt_ab_N | ECOD (1.6) |

A | ATP-synt_ab_C | e8gxuA4 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: ATP-synt_ab_C | ECOD (1.6) |

A | ATP-synt_ab_Xtn | e8gxuA1 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Single hybrid motif | F: ATP-synt_ab_Xtn | ECOD (1.6) |

A | ATP-synt_ab | e8gxuA3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |

B | ATP-synt_ab_N | e8gxuB2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: ATP-synt_ab_N | ECOD (1.6) |

B | ATP-synt_ab_C | e8gxuB4 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: ATP-synt_ab_C | ECOD (1.6) |

B | ATP-synt_ab_Xtn | e8gxuB1 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Single hybrid motif | F: ATP-synt_ab_Xtn | ECOD (1.6) |

B | ATP-synt_ab | e8gxuB3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |

C | ATP-synt_ab_N | e8gxuC2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: ATP-synt_ab_N | ECOD (1.6) |

C | ATP-synt_ab_C | e8gxuC3 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: ATP-synt_ab_C | ECOD (1.6) |

C | ATP-synt_ab_Xtn | e8gxuC4 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Single hybrid motif | F: ATP-synt_ab_Xtn | ECOD (1.6) |

C | ATP-synt_ab | e8gxuC1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |

D | ATP-synt_ab_N | e8gxuD3 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: ATP-synt_ab_N | ECOD (1.6) |

D | ATP-synt_ab_C | e8gxuD1 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: ATP-synt_ab_C | ECOD (1.6) |

D | ATP-synt_ab | e8gxuD2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |

E | ATP-synt_ab_N | e8gxuE2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: ATP-synt_ab_N | ECOD (1.6) |

E | ATP-synt_ab_C | e8gxuE1 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: ATP-synt_ab_C | ECOD (1.6) |

E | ATP-synt_ab | e8gxuE3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |

F | ATP-synt_ab_N | e8gxuF2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: ATP-synt_ab_N | ECOD (1.6) |

F | ATP-synt_ab_C | e8gxuF1 | A: alpha superhelices | X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology) | T: C-terminal domain of alpha and beta subunits of F1 ATP synthase | F: ATP-synt_ab_C | ECOD (1.6) |

F | ATP-synt_ab | e8gxuF3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ATP-synt_ab | ECOD (1.6) |

G | ATP-synt_D | e8gxuG1 | A: alpha bundles | X: V-type proton ATPase subunit D (From Topology) | H: V-type proton ATPase subunit D (From Topology) | T: V-type proton ATPase subunit D | F: ATP-synt_D | ECOD (1.6) |

H | ATP-synt_F | e8gxuH1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: AtpF-like (From Topology) | T: AtpF-like | F: ATP-synt_F | ECOD (1.6) |

I | V-ATPase_G_2 | e8gxuI1 | A: extended segments | X: V-type proton ATPase subunit G (From Topology) | H: V-type proton ATPase subunit G (From Topology) | T: V-type proton ATPase subunit G | F: V-ATPase_G_2 | ECOD (1.6) |

K | V-ATPase_G_2 | e8gxuK1 | A: extended segments | X: V-type proton ATPase subunit G (From Topology) | H: V-type proton ATPase subunit G (From Topology) | T: V-type proton ATPase subunit G | F: V-ATPase_G_2 | ECOD (1.6) |

J | vATP-synt_E_C | e8gxuJ1 | A: a+b two layers | X: FwdE/GAPDH domain-like | H: V-type ATPase subunit E (From Topology) | T: V-type ATPase subunit E | F: vATP-synt_E_C | ECOD (1.6) |

L | vATP-synt_E_C | e8gxuL1 | A: a+b two layers | X: FwdE/GAPDH domain-like | H: V-type ATPase subunit E (From Topology) | T: V-type ATPase subunit E | F: vATP-synt_E_C | ECOD (1.6) |

#### Protein Family Annotation Pfam Database Homepage

Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|

PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain | |

PF22919 | C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C) | C-terminal domain of V and A type ATP synthase | This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases. | Domain | |

PF16886 | ATPsynthase alpha/beta subunit N-term extension (ATP-synt_ab_Xtn) | ATPsynthase alpha/beta subunit N-term extension | - | Family | |

PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain | |

PF00006 | ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab) | ATP synthase alpha/beta family, nucleotide-binding domain | This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho. | Domain | |

PF22919 | C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C) | C-terminal domain of V and A type ATP synthase | This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases. | Domain | |

PF02874 | ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N) | ATP synthase alpha/beta family, beta-barrel domain | This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella. | Domain | |

PF01813 | ATP synthase subunit D (ATP-synt_D) | ATP synthase subunit D | - | Family | |

PF01990 | ATP synthase (F/14-kDa) subunit (ATP-synt_F) | ATP synthase (F/14-kDa) subunit | - | Family | |