8V5S

VZV glycoprotein E C-terminal domain (cleaved) in complex with human Fab 5A2

External Resource: Annotation


SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
A [auth H],
C [auth A]		Heavy ChainIGHV4 -envelope glycoprotein eSAbDab (2024-12-13)
B [auth L],
D [auth B]		Light ChainIGKV1 Kappaenvelope glycoprotein eSAbDab (2024-12-13)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
E [auth C],
F [auth D]		PF02480Alphaherpesvirus glycoprotein E (Herpes_gE)Alphaherpesvirus glycoprotein EGlycoprotein E (gE) of Alphaherpesvirus forms a complex with glycoprotein I (gI) (Pfam:PF01688), functioning as an immunoglobulin G (IgG) Fc binding protein. gE is involved in virus spread but is not essential for propagation [1]. This entry represe ...Glycoprotein E (gE) of Alphaherpesvirus forms a complex with glycoprotein I (gI) (Pfam:PF01688), functioning as an immunoglobulin G (IgG) Fc binding protein. gE is involved in virus spread but is not essential for propagation [1]. This entry represents the Ig-like domain of gE, identified as the Fc-binding domain [2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth H],
C [auth A]		5A2 Fab Heavy Chain---
B [auth L],
D [auth B]		5A2 Fab Light Chain---
E [auth C],
F [auth D]		Envelope glycoprotein E- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
E [auth C],
F [auth D]		IPR013783Immunoglobulin-like foldHomologous Superfamily
E [auth C],
F [auth D]		IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
E [auth C],
F [auth D]		IPR046463Envelope glycoprotein E, N-terminalDomain
E [auth C],
F [auth D]		IPR003404Envelope glycoprotein E, Fc-binding domainDomain