8XT2 | pdb_00008xt2

Cryo-EM structure of the human 55S mitoribosome with 10uM Tigecycline


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
I [auth LM]SCOP2B SuperfamilyRibosomal protein L13 8100460 3001134 SCOP2B (2022-06-29)
HB [auth SK]SCOP2B SuperfamilyTranslational machinery components 8098948 3000571 SCOP2B (2022-06-29)
JB [auth SN]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052599 3000068 SCOP2B (2022-06-29)
PB [auth SW]SCOP2B SuperfamilyRibosomal protein S21 8053089 3002159 SCOP2B (2022-06-29)
QB [auth SX]SCOP2B SuperfamilyMitochondrial 28S ribosomal protein S22-like 8051932 3002074 SCOP2B (2022-06-29)
XB [auth Sg]SCOP2B SuperfamilyMitochondrial 28S ribosomal protein S31-like 8090914 3002471 SCOP2B (2022-06-29)
ZB [auth Sj]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8091481 3000334 SCOP2B (2022-06-29)
J [auth LN]SCOP2B Superfamily50S Ribosomal protein L14-like 8072072 3000433 SCOP2B (2022-06-29)
M [auth LQ]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8033689 3000995 SCOP2B (2022-06-29)
Z [auth Lg]SCOP2B SuperfamilyZn-binding ribosomal proteins 8075050 3001320 SCOP2B (2022-06-29)
CA [auth Lj]SCOP2B SuperfamilyRibosomal protein L36 8083324 3001346 SCOP2B (2022-06-29)
HA [auth Lo]SCOP2B SuperfamilyMitochondrial ribosomal protein L27-like 8053893 3002240 SCOP2B (2022-06-29)
E [auth LD]SCOP2B SuperfamilyRibosomal protein L4 8080706 3001146 SCOP2B (2022-06-29)
AB [auth SB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8063850 3001397 SCOP2B (2022-06-29)
IB [auth SL]SCOP2B SuperfamilyNucleic acid-binding proteins 8095431 3000135 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth LB]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
C [auth LB]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domainDomain
C [auth LB]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
D [auth LC]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
H [auth LK]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
H [auth LK]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
I [auth LM]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
N [auth LR]PF22935Large ribosomal subunit protein mL44, endonuclease domain (RM44_endonuclase)Large ribosomal subunit protein mL44, endonuclease domainLarge ribosomal subunit protein mL44 (RM44) is a component of the 39S subunit of mitochondrial ribosome. It may play a role in the assembly/stability of nascent mitochondrial polypeptides exiting the ribosome. This entry represents the endonuclease ( ...Domain
N [auth LR]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
O [auth LS]PF04280Tim44-like domain (Tim44)Tim44-like domainTim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostati ...Domain
O [auth LS]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
P [auth LT]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
P [auth LT]PF1178839S mitochondrial ribosomal protein L46 (MRP-L46)39S mitochondrial ribosomal protein L46- Family
Q [auth LU]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
Q [auth LU]PF06984Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47)Mitochondrial 39-S ribosomal protein L47 (MRP-L47)- Family
T [auth LX]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
T [auth LX]PF00467KOW motif (KOW)KOW motif- Family
T [auth LX]PF10501Ribosomal subunit 39S (Ribosomal_L50)Ribosomal subunit 39SThe 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absenc ...Domain
VA [auth L6]PF14978Mitochondrial ribosome protein 63 (MRP-63)Mitochondrial ribosome protein 63- Family
YA [auth SR]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
DB [auth SF]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
HB [auth SK]PF10213Mitochondrial ribosomal subunit protein (MRP-S28)Mitochondrial ribosomal subunit protein- Family
HB [auth SK]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
JB [auth SN]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
LB [auth SP]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
PB [auth SW]PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
QB [auth SX]PF10245Mitochondrial 28S ribosomal protein S22 (MRP-S22)Mitochondrial 28S ribosomal protein S22- Family
J [auth LN]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
K [auth LO]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
L [auth LP]PF10210Mitochondrial 28S ribosomal protein S32 (MRP-S32)Mitochondrial 28S ribosomal protein S32- Family
L [auth LP]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
M [auth LQ]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
M [auth LQ]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...Domain
R [auth LV]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
R [auth LV]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
S [auth LW]PF05046Mitochondrial large subunit ribosomal protein (Img2) (Img2)Mitochondrial large subunit ribosomal protein (Img2)This family of proteins have been identified as part of the mitochondrial large ribosomal subunit in yeast [1]. Domain
S [auth LW]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
SA [auth L3]PF1078039S ribosomal protein L53/MRP-L53 (MRP_L53)39S ribosomal protein L53/MRP-L53- Family
TA [auth L4]PF08561Mitochondrial ribosomal protein L37 (Ribosomal_L37)Mitochondrial ribosomal protein L37- Family
E [auth LD]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
E [auth LD]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
AB [auth SB]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
AB [auth SB]PF14943Mitochondrial ribosome subunit S26 (MRP-S26)Mitochondrial ribosome subunit S26- Family
BB [auth SZ]PF14955Mitochondrial ribosome subunit S24 (MRP-S24)Mitochondrial ribosome subunit S24- Family
CB [auth SE]PF21251Small ribosomal subunit protein uS5m, N-terminal (Ribosomal_uS5m_N)Small ribosomal subunit protein uS5m, N-terminalThis entry represents an extension found at the N-terminal of the mitochondrial 28S Small ribosomal subunit protein uS5m [1,2]. This region lines a part of the mRNA entry path and connects the 28S subunit body to the head forming a latch across the m ...Domain
CB [auth SE]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
CB [auth SE]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
CB [auth SE]PF10236Mitochondrial ribosomal death-associated protein 3 (DAP3)Mitochondrial ribosomal death-associated protein 3- Family
EB [auth SG]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
FB [auth SI]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
FB [auth SI]PF08293Mitochondrial ribosomal subunit S27 (MRP-S33)Mitochondrial ribosomal subunit S27- Family
GB [auth SJ]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
GB [auth SJ]PF16053Mitochondrial 28S ribosomal protein S34 (MRP-S34)Mitochondrial 28S ribosomal protein S34- Family
F [auth LI]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
F [auth LI]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
IB [auth SL]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
KB [auth SO]PF22330Small ribosomal subunit protein mS39, PPR (Rib_mS39_PPR)Small ribosomal subunit protein mS39, PPR- Repeat
KB [auth SO]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
MB [auth SQ]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
NB [auth SS]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
OB [auth ST]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
G [auth LJ]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
G [auth LJ]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36Domain
RB [auth SY]PF10484Mitochondrial ribosomal protein S23 (MRP-S23)Mitochondrial ribosomal protein S23- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth L1]16s rRNA---
C [auth LB]Large ribosomal subunit protein uL2m
D [auth LC]Large ribosomal subunit protein uL3m
H [auth LK]Large ribosomal subunit protein uL11m
I [auth LM]Large ribosomal subunit protein uL13m
N [auth LR]Mitochondrial ribosomal protein L18, isoform CRA_b
O [auth LS]Large ribosomal subunit protein bL19m
P [auth LT]Large ribosomal subunit protein bL20m
Q [auth LU]Large ribosomal subunit protein bL21m
T [auth LX]Large ribosomal subunit protein uL24m
U [auth La]Large ribosomal subunit protein bL27m
W [auth Lu]Large ribosomal subunit protein uL29m
Y [auth Lf]Large ribosomal subunit protein bL32m
AA [auth Lh]Large ribosomal subunit protein bL34m
BA [auth Li]Large ribosomal subunit protein bL35m
DA [auth Lk]Large ribosomal subunit protein mL37
GA [auth Ln]Large ribosomal subunit protein mL40
LA [auth Ls]Large ribosomal subunit protein mL45
NA [auth Lv]Large ribosomal subunit protein mL48-
UA [auth L5]Large ribosomal subunit protein mL55
VA [auth L6]Large ribosomal subunit protein mL63
WA [auth L7]Large ribosomal subunit protein mL62
XA [auth L8]Large ribosomal subunit protein mL64-
YA [auth SR]Large ribosomal subunit protein mL66
ZA [auth Sf]Large ribosomal subunit protein mL65
DB [auth SF]Small ribosomal subunit protein bS6m
HB [auth SK]Small ribosomal subunit protein uS11m
JB [auth SN]Small ribosomal subunit protein uS14m
LB [auth SP]Small ribosomal subunit protein bS16m
PB [auth SW]Small ribosomal subunit protein bS21m
QB [auth SX]Small ribosomal subunit protein mS22
SB [auth Sa]Small ribosomal subunit protein mS25
TB [auth Sb]Small ribosomal subunit protein mS26
VB [auth Sd]Small ribosomal subunit protein bS1m
XB [auth Sg]Small ribosomal subunit protein mS31
YB [auth Si]Small ribosomal subunit protein mS33
ZB [auth Sj]Small ribosomal subunit protein mS34
AC [auth Sk]Small ribosomal subunit protein mS35
BC [auth Sm]Small ribosomal subunit protein mS37
CC [auth Sn]Small ribosomal subunit protein mS38-
EC [auth S1]12s rRNA---
J [auth LN]Large ribosomal subunit protein uL14m
K [auth LO]Large ribosomal subunit protein uL15m
L [auth LP]Large ribosomal subunit protein uL16m
M [auth LQ]Large ribosomal subunit protein bL17m
R [auth LV]39S ribosomal protein L22, mitochondrial
S [auth LW]Large ribosomal subunit protein uL23m
B [auth L2]Val tRNA---
V [auth Lb]Large ribosomal subunit protein bL28m
X [auth Ld]Large ribosomal subunit protein uL30m
Z [auth Lg]Large ribosomal subunit protein bL33m
CA [auth Lj]Large ribosomal subunit protein bL36m
EA [auth Ll]Large ribosomal subunit protein mL38-
FA [auth Lm]Large ribosomal subunit protein mL39
HA [auth Lo]Large ribosomal subunit protein mL41
IA [auth Lp]Large ribosomal subunit protein mL42
JA [auth Lq]Large ribosomal subunit protein mL43
KA [auth Lr]Large ribosomal subunit protein mL44
MA [auth Lt]Large ribosomal subunit protein mL46
OA [auth Lw]Large ribosomal subunit protein mL49
PA [auth Lx]Large ribosomal subunit protein mL50-
QA [auth Ly]Large ribosomal subunit protein mL51
RA [auth Lz]39S ribosomal protein L52, mitochondrial
SA [auth L3]Large ribosomal subunit protein mL53-
TA [auth L4]Large ribosomal subunit protein mL54
E [auth LD]Large ribosomal subunit protein uL4m
AB [auth SB]Small ribosomal subunit protein uS2m
BB [auth SZ]Small ribosomal subunit protein uS3m
CB [auth SE]Small ribosomal subunit protein uS5m
EB [auth SG]Small ribosomal subunit protein uS7m
FB [auth SI]Small ribosomal subunit protein uS9m
GB [auth SJ]Small ribosomal subunit protein uS10m-
F [auth LI]Large ribosomal subunit protein bL9m
IB [auth SL]Small ribosomal subunit protein uS12m
KB [auth SO]Small ribosomal subunit protein uS15m
MB [auth SQ]Small ribosomal subunit protein uS17m
NB [auth SS]Small ribosomal subunit protein mS40
OB [auth ST]Small ribosomal subunit protein bS18m
G [auth LJ]Large ribosomal subunit protein uL10m
RB [auth SY]Small ribosomal subunit protein mS23
UB [auth Sc]Small ribosomal subunit protein mS27
WB [auth Se]Small ribosomal subunit protein mS29
DC [auth So]Small ribosomal subunit protein mS39

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth LB]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
C [auth LB]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
C [auth LB]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
C [auth LB]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth LB]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
C [auth LB]IPR002171Large ribosomal subunit protein uL2Family
D [auth LC]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
D [auth LC]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
D [auth LC]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
D [auth LC]IPR000597Large ribosomal subunit protein uL3Family
H [auth LK]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
H [auth LK]IPR000911Ribosomal protein uL11Family
H [auth LK]IPR006519Large ribosomal subunit protein uL11, bacterial-typeFamily
H [auth LK]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
H [auth LK]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
H [auth LK]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
I [auth LM]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
I [auth LM]IPR005822Large ribosomal subunit protein uL13Family
I [auth LM]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
I [auth LM]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
N [auth LR]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
N [auth LR]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
O [auth LS]IPR001857Large ribosomal subunit protein bL19Family
O [auth LS]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
O [auth LS]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
P [auth LT]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
P [auth LT]IPR005813Large ribosomal subunit protein bL20Family
Q [auth LU]IPR028909Large ribosomal subunit protein bL21-likeFamily
Q [auth LU]IPR001787Large ribosomal subunit protein bL21Family
Q [auth LU]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
T [auth LX]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
T [auth LX]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
T [auth LX]IPR003256Large ribosomal subunit protein uL24Family
T [auth LX]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
T [auth LX]IPR005824KOWDomain
T [auth LX]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
U [auth La]IPR001684Large ribosomal subunit protein bL27Family
W [auth Lu]IPR038340MRP-L47 superfamily, mitochondrialHomologous Superfamily
W [auth Lu]IPR010729Large ribosomal subunit protein uL29m, mitochondrialFamily
Y [auth Lf]IPR002677Large ribosomal subunit protein bL32Family
Y [auth Lf]IPR051991Mitochondrial ribosomal protein bL32Family
Y [auth Lf]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AA [auth Lh]IPR000271Large ribosomal subunit protein bL34Family
BA [auth Li]IPR021137Large ribosomal subunit protein bL35-likeFamily
BA [auth Li]IPR019338Large ribosomal subunit protein bL35mFamily
BA [auth Li]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
DA [auth Lk]IPR052482Mitochondrial large ribosomal subunit mL37Family
DA [auth Lk]IPR010793Large ribosomal subunit protein mL37/mL65Family
GA [auth Ln]IPR019192Large ribosomal subunit protein mL40Family
GA [auth Ln]IPR039145Large ribosomal subunit protein mL40, metazoa/plantsFamily
LA [auth Ls]IPR032710NTF2-like domain superfamilyHomologous Superfamily
LA [auth Ls]IPR007379Tim44-like domainDomain
LA [auth Ls]IPR051975Mitochondrial Large Ribosomal Subunit mL45Family
NA [auth Lv]IPR027486Small ribosomal subunit protein uS10 domainDomain
NA [auth Lv]IPR027487Large ribosomal subunit protein mL48Family
NA [auth Lv]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
UA [auth L5]IPR044884Large ribosomal subunit protein mL55 superfamilyHomologous Superfamily
UA [auth L5]IPR018615Large ribosomal subunit protein mL55Family
VA [auth L6]IPR016576Large ribosomal subunit protein mL63Family
WA [auth L7]IPR052104Mitochondrial Release Factor mL62Family
WA [auth L7]IPR000352Peptide chain release factor class IDomain
XA [auth L8]IPR018472Large ribosomal subunit protein mL64Family
XA [auth L8]IPR043035Large ribosomal subunit protein mL64 domain superfamilyHomologous Superfamily
YA [auth SR]IPR001648Small ribosomal subunit protein bS18Family
YA [auth SR]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
ZA [auth Sf]IPR039982Large ribosomal subunit protein mL65Family
ZA [auth Sf]IPR010793Large ribosomal subunit protein mL37/mL65Family
DB [auth SF]IPR000529Small ribosomal subunit protein bS6Family
DB [auth SF]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
DB [auth SF]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
HB [auth SK]IPR001971Small ribosomal subunit protein uS11Family
HB [auth SK]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
HB [auth SK]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
JB [auth SN]IPR001209Small ribosomal subunit protein uS14Family
LB [auth SP]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
LB [auth SP]IPR000307Small ribosomal subunit protein bS16Family
PB [auth SW]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
PB [auth SW]IPR001911Small ribosomal subunit protein bS21Family
QB [auth SX]IPR019374Small ribosomal subunit protein mS22Family
SB [auth Sa]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
SB [auth Sa]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
SB [auth Sa]IPR040049Ribosomal subunit protein mS25/mL61, mitochondrialFamily
TB [auth Sb]IPR026140Small ribosomal subunit protein mS26Family
VB [auth Sd]IPR019375Small ribosomal subunit protein bS1mFamily
XB [auth Sg]IPR026299Mitochondrial 28S ribosomal protein S31Family
YB [auth Si]IPR013219Small ribosomal subunit protein mS33Family
ZB [auth Sj]IPR032053Small ribosomal subunit protein mS34Family
AC [auth Sk]IPR039848Small ribosomal subunit protein mS35, mitochondrialFamily
AC [auth Sk]IPR019349Small ribosomal subunit protein mS35, mitochondrial, conserved domainDomain
BC [auth Sm]IPR010625CHCHDomain
BC [auth Sm]IPR009069Cysteine alpha-hairpin motif superfamilyHomologous Superfamily
BC [auth Sm]IPR033620Small ribosomal subunit protein mS37, metazoanFamily
CC [auth Sn]IPR013177Ribosomal protein mS38, C-terminalDomain
J [auth LN]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
J [auth LN]IPR000218Large ribosomal subunit protein uL14Family
K [auth LO]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
K [auth LO]IPR021131Large ribosomal subunit protein uL15/eL18Domain
K [auth LO]IPR030878Large ribosomal subunit protein uL15Family
K [auth LO]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
L [auth LP]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
L [auth LP]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
L [auth LP]IPR016180Large ribosomal subunit protein uL16 domainDomain
L [auth LP]IPR047873Large ribosomal subunit protein uL16Family
M [auth LQ]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
M [auth LQ]IPR000456Large ribosomal subunit protein bL17Family
R [auth LV]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
R [auth LV]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
R [auth LV]IPR001063Large ribosomal subunit protein uL22Family
S [auth LW]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
S [auth LW]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
S [auth LW]IPR013025Large ribosomal subunit protein uL23-likeFamily
V [auth Lb]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
V [auth Lb]IPR026569Large ribosomal subunit protein bL28Family
V [auth Lb]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
X [auth Ld]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
X [auth Ld]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
X [auth Ld]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
Z [auth Lg]IPR052008Mitochondrial ribosomal protein bL33Family
Z [auth Lg]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
Z [auth Lg]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
Z [auth Lg]IPR001705Large ribosomal subunit protein bL33Family
CA [auth Lj]IPR000473Large ribosomal subunit protein bL36Family
CA [auth Lj]IPR052143Mitochondrial Large Ribosomal Subunit bL36mFamily
CA [auth Lj]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
EA [auth Ll]IPR036610PEBP-like superfamilyHomologous Superfamily
EA [auth Ll]IPR008914Phosphatidylethanolamine-binding proteinFamily
EA [auth Ll]IPR035810Phosphatidylethanolamine-binding protein, eukaryoticFamily
FA [auth Lm]IPR012676TGS-likeHomologous Superfamily
FA [auth Lm]IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyHomologous Superfamily
FA [auth Lm]IPR050062Proline-tRNA synthetaseFamily
FA [auth Lm]IPR004095TGSDomain
FA [auth Lm]IPR012675Beta-grasp domain superfamilyHomologous Superfamily
HA [auth Lo]IPR019189Large ribosomal subunit protein mL41Family
IA [auth Lp]IPR019346Large ribosomal subunit protein mL42Family
JA [auth Lq]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
JA [auth Lq]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
JA [auth Lq]IPR039927Large ribosomal subunit protein mL43Family
KA [auth Lr]IPR036389Ribonuclease III, endonuclease domain superfamilyHomologous Superfamily
KA [auth Lr]IPR044444Large ribosomal subunit protein mL44, dsRNA binding domain, metazoaDomain
KA [auth Lr]IPR055189Large ribosomal subunit protein mL44, endonuclease domainDomain
KA [auth Lr]IPR014720Double-stranded RNA-binding domainDomain
MA [auth Lt]IPR015797NUDIX hydrolase-like domain superfamilyHomologous Superfamily
MA [auth Lt]IPR021757Large ribosomal subunit protein mL46, N-terminalDomain
MA [auth Lt]IPR040008Large ribosomal subunit protein mL46Family
MA [auth Lt]IPR033650Large ribosomal subunit protein mL46, NUDIX domainDomain
OA [auth Lw]IPR007740Large ribosomal subunit protein mL49Family
PA [auth Lx]IPR018305Large ribosomal subunit protein mL50Family
QA [auth Ly]IPR019373Large ribosomal subunit protein mL51Family
RA [auth Lz]IPR034596Large ribosomal subunit protein mL52Family
SA [auth L3]IPR019716Large ribosomal subunit protein mL53Family
SA [auth L3]IPR052473Mitochondrial Large Ribosomal Subunit mL53Family
TA [auth L4]IPR013870Large ribosomal subunit protein mL54Family
E [auth LD]IPR013005Large ribosomal subunit protein uL4-likeFamily
E [auth LD]IPR002136Large ribosomal subunit protein uL4Family
E [auth LD]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
AB [auth SB]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
AB [auth SB]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
AB [auth SB]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
AB [auth SB]IPR001865Small ribosomal subunit protein uS2Family
BB [auth SZ]IPR026146Small ribosomal subunit protein uS3m, metazoanFamily
CB [auth SE]IPR000851Small ribosomal subunit protein uS5Family
CB [auth SE]IPR048584Small ribosomal subunit protein uS5m, N-terminal domainDomain
CB [auth SE]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
CB [auth SE]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
CB [auth SE]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
CB [auth SE]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
CB [auth SE]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
EB [auth SG]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
EB [auth SG]IPR000235Small ribosomal subunit protein uS7Family
EB [auth SG]IPR023798Small ribosomal subunit protein uS7 domainDomain
FB [auth SI]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
FB [auth SI]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
FB [auth SI]IPR000754Small ribosomal subunit protein uS9Family
FB [auth SI]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
GB [auth SJ]IPR027486Small ribosomal subunit protein uS10 domainDomain
GB [auth SJ]IPR040055Small ribosomal subunit protein uS10mFamily
GB [auth SJ]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
F [auth LI]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
F [auth LI]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
F [auth LI]IPR054302Large ribosomal subunit protein bL9m, C-terminal domainDomain
F [auth LI]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
F [auth LI]IPR000244Large ribosomal subunit protein bL9Family
IB [auth SL]IPR006032Small ribosomal subunit protein uS12Family
IB [auth SL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IB [auth SL]IPR005679Ribosomal protein uS12, bacterial-typeFamily
KB [auth SO]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
KB [auth SO]IPR000589Small ribosomal subunit protein uS15Family
KB [auth SO]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
KB [auth SO]IPR052137Universal small ribosomal subunit uS15Family
MB [auth SQ]IPR039193Small ribosomal subunit protein uS17m, metazoaFamily
MB [auth SQ]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
MB [auth SQ]IPR000266Small ribosomal subunit protein uS17Family
NB [auth SS]IPR040054Small ribosomal subunit protein mS40Family
NB [auth SS]IPR001648Small ribosomal subunit protein bS18Family
NB [auth SS]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
OB [auth ST]IPR001648Small ribosomal subunit protein bS18Family
OB [auth ST]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
OB [auth ST]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
G [auth LJ]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
G [auth LJ]IPR001790Large ribosomal subunit protein uL10Family
G [auth LJ]IPR047865Large ribosomal subunit protein uL10, bacterial typeFamily
RB [auth SY]IPR023611Small ribosomal subunit protein mS23, conserved domainDomain
RB [auth SY]IPR019520Small ribosomal subunit protein mS23, metazoaFamily
UB [auth Sc]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
UB [auth Sc]IPR002885Pentatricopeptide repeatRepeat
UB [auth Sc]IPR019266Small ribosomal subunit protein mS27Family
UB [auth Sc]IPR034913mS27/PTCD2Family
WB [auth Se]IPR008092Small ribosomal subunit protein mS29, metazoan-typeFamily
WB [auth Se]IPR019368Small ribosomal subunit protein mS29Family
WB [auth Se]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
DC [auth So]IPR037387Pentatricopeptide repeat domain-containing protein 3Family
DC [auth So]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
DC [auth So]IPR002885Pentatricopeptide repeatRepeat
DC [auth So]IPR055063Small ribosomal subunit protein mS39, PPRRepeat

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
C [auth LB]PharosQ5T653
D [auth LC]PharosP09001
H [auth LK]PharosQ9Y3B7
I [auth LM]PharosQ9BYD1
N [auth LR]PharosQ9H0U6
O [auth LS]PharosP49406
P [auth LT]PharosQ9BYC9
T [auth LX]PharosQ96A35
U [auth La]PharosQ9P0M9
W [auth Lu]PharosQ9HD33
Y [auth Lf]PharosQ9BYC8
AA [auth Lh]PharosQ9BQ48
BA [auth Li]PharosQ9NZE8
DA [auth Lk]PharosQ9BZE1
GA [auth Ln]PharosQ9NQ50
LA [auth Ls]PharosQ9BRJ2
NA [auth Lv]PharosQ96GC5
UA [auth L5]PharosQ7Z7F7
VA [auth L6]PharosQ9BQC6
WA [auth L7]PharosQ14197
XA [auth L8]PharosQ8TAE8
YA [auth SR]PharosQ9NVS2
ZA [auth Sf]PharosQ9NP92
DB [auth SF]PharosP82932
HB [auth SK]PharosP82912
JB [auth SN]PharosO60783
LB [auth SP]PharosQ9Y3D3
PB [auth SW]PharosP82921
QB [auth SX]PharosP82650
SB [auth Sa]PharosP82663
VB [auth Sd]PharosQ9Y2Q9
XB [auth Sg]PharosQ92665
YB [auth Si]PharosQ9Y291
ZB [auth Sj]PharosP82930
AC [auth Sk]PharosP82673
BC [auth Sm]PharosQ96BP2
CC [auth Sn]PharosQ9NWT8
J [auth LN]PharosQ6P1L8
K [auth LO]PharosQ9P015
L [auth LP]PharosQ9NX20
M [auth LQ]PharosQ9NRX2
R [auth LV]PharosQ9NWU5
S [auth LW]PharosQ16540
V [auth Lb]PharosQ13084
X [auth Ld]PharosQ8TCC3
Z [auth Lg]PharosO75394
CA [auth Lj]PharosQ9P0J6
FA [auth Lm]PharosQ9NYK5
HA [auth Lo]PharosQ8IXM3
IA [auth Lp]PharosQ9Y6G3
JA [auth Lq]PharosQ8N983
KA [auth Lr]PharosQ9H9J2
OA [auth Lw]PharosQ13405
PA [auth Lx]PharosQ8N5N7
QA [auth Ly]PharosQ4U2R6
RA [auth Lz]PharosQ86TS9
TA [auth L4]PharosQ6P161
E [auth LD]PharosQ9BYD3
AB [auth SB]PharosQ9Y399
CB [auth SE]PharosP82675
EB [auth SG]PharosQ9Y2R9
FB [auth SI]PharosP82933
GB [auth SJ]PharosP82664
F [auth LI]PharosQ9BYD2
IB [auth SL]PharosO15235
KB [auth SO]PharosP82914
MB [auth SQ]PharosQ9Y2R5
NB [auth SS]PharosQ9Y676
OB [auth ST]PharosQ9Y3D5
G [auth LJ]PharosQ7Z7H8
RB [auth SY]PharosQ9Y3D9
UB [auth Sc]PharosQ92552
WB [auth Se]PharosP51398
DC [auth So]PharosQ96EY7