1NMR

Solution Structure of C-terminal Domain from Trypanosoma cruzi Poly(A)-Binding Protein


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY2mM TcPABC, unlabelled, 50mM phosphate buffer, 150mM NaCl, 1mM NaN3, pH 6.3, 90% H2O, 10% D2O90% H2O/10% D2O50mM Phosphate, 150mM NaCl6.3Ambient303
23D_15N-separated_NOESY2mM TcPABC U-15N, 50mM phosphate buffer, 150mM NaCl, 1mM NaN3, pH 6.3, 90% H2O, 10% D2O90% H2O/10% D2O50mM Phosphate, 150mM NaCl6.3Ambient303
3HNHA2mM TcPABC U-15N, 50mM phosphate buffer, 150mM NaCl, 1mM NaN3, pH 6.3, 90% H2O, 10% D2O90% H2O/10% D2O50mM Phosphate, 150mM NaCl6.3Ambient303
43D_13C-separated_NOESY2mM TcPABC U-15N,13C, 50mM phosphate buffer, 150mM NaCl, 1mM NaN3, pH 6.3100% D2050mM Phosphate, 150mM NaCl6.3Ambient303
5IPAP-HSQC2mM TcPABC U-15N, 50mM phosphate buffer, 150mM NaCl, 1mM NaN3, 18mg/ml Pf1 phage, pH 6.3, 90% H2O, 10% D2O90% H2O/10% D2O50mM Phosphate, 150mM NaCl6.3Ambient303
62D NOESY2mM TcPABC, unlabelled, 50mM phosphate buffer, 150mM NaCl, 1mM NaN3, pH 6.3100% D2050mM Phosphate, 150mM NaCl6.3Ambient303
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX500
2VarianUNITYPLUS800
3BrukerAVANCE600
NMR Refinement
MethodDetailsSoftware
simulated annealingThe structures are based on a total of 1170 restraints: 974 are NOE-derived distance constraints, 78 dihedral angle restraints,49 distance restraints from hydrogen bonds and 69 15N-1H residual dipolar couplingsXwinNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations,structures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model8 (lowest energy)
Additional NMR Experimental Information
DetailsThis structure was determined using standard 2D homonuclear and 3D heteronuclear techniques.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR2.1Bruker BioSpin
2processingGifa4.31Delsuc
3data analysisXEASY1.3.13Wuthrich
4refinementCNS1.1Brunger
5structure solutionARIA1.1Nilges