1LDB
STRUCTURE DETERMINATION AND REFINEMENT OF BACILLUS STEAROTHERMOPHILUS LACTATE DEHYDROGENASE
X-RAY DIFFRACTION
Crystallization
Crystal Properties | |
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Matthews coefficient | Solvent content |
2.79 | 55.89 |
Crystal Data
Unit Cell | |
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Length ( Å ) | Angle ( ˚ ) |
a = 86.9 | α = 90 |
b = 86.9 | β = 90 |
c = 357.3 | γ = 120 |
Symmetry | |
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Space Group | P 61 |
Refinement
Statistics | |||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Diffraction ID | Structure Solution Method | Resolution (High) | Resolution (Low) | Number Reflections (R-Free) | Percent Reflections (Observed) | R-Factor (Observed) | R-Work | R-Free | Mean Isotropic B | ||||||||||
X-RAY DIFFRACTION | 2.8 | 6 | 0.286 |
Temperature Factor Modeling | ||||||
---|---|---|---|---|---|---|
Anisotropic B[1][1] | Anisotropic B[1][2] | Anisotropic B[1][3] | Anisotropic B[2][2] | Anisotropic B[2][3] | Anisotropic B[3][3] | |
RMS Deviations | |
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Key | Refinement Restraint Deviation |
p_orthonormal_tor | 29.4 |
p_staggered_tor | 19.9 |
p_planar_tor | 5.3 |
p_scangle_it | 3.14 |
p_mcangle_it | 2.03 |
p_scbond_it | 1.92 |
p_mcbond_it | 1.19 |
p_multtor_nbd | 0.305 |
p_xhyhbond_nbd | 0.25 |
p_singtor_nbd | 0.238 |
Non-Hydrogen Atoms Used in Refinement | |
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Non-Hydrogen Atoms | Number |
Protein Atoms | 9108 |
Nucleic Acid Atoms | |
Solvent Atoms | 1 |
Heterogen Atoms | 10 |
Software
Software | |
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Software Name | Purpose |
PROLSQ | refinement |