2A7H

On the Routine Use of Soft X-Rays in Macromolecular Crystallography, Part III- The Optimal Data Collection Wavelength


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
1.9236.06

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 54.19α = 90
b = 54.19β = 90
c = 105.86γ = 120
Symmetry
Space GroupP 31 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100 MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONELETTRA BEAMLINE 5.2RELETTRA5.2R

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.13010801

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONFOURIER SYNTHESISTHROUGHOUT2.130108012161000.1660.1660.23RANDOM10.25
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.23-0.12-0.230.35
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.482
r_dihedral_angle_4_deg21.216
r_dihedral_angle_3_deg16.919
r_dihedral_angle_1_deg7.294
r_scangle_it6.679
r_scbond_it4.997
r_angle_refined_deg2.186
r_mcangle_it2.132
r_mcbond_it1.273
r_symmetry_hbond_refined0.675
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg39.482
r_dihedral_angle_4_deg21.216
r_dihedral_angle_3_deg16.919
r_dihedral_angle_1_deg7.294
r_scangle_it6.679
r_scbond_it4.997
r_angle_refined_deg2.186
r_mcangle_it2.132
r_mcbond_it1.273
r_symmetry_hbond_refined0.675
r_symmetry_vdw_refined0.422
r_nbtor_refined0.311
r_nbd_refined0.222
r_xyhbond_nbd_refined0.18
r_chiral_restr0.152
r_metal_ion_refined0.139
r_bond_refined_d0.025
r_gen_planes_refined0.011
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1626
Nucleic Acid Atoms
Solvent Atoms116
Heterogen Atoms3

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling