X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
17.550% MPD, 0.1 M HEPES, PH 7.5, 0.2 MM EDTA, 5 MM 2-MECAPTOETHANOL, 10 MM L-SER
Crystal Properties
Matthews coefficientSolvent content
2.141

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 61.304α = 90
b = 106.472β = 90
c = 57.289γ = 90
Symmetry
Space GroupP 21 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100 MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODE1.54

Data Collection

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONFOURIER SYNTHESISTHROUGHOUTNONE1.827.0333655177299.70.1680.1660.2RANDOM17.78
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.010.02-0.02
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.454
r_dihedral_angle_4_deg16.324
r_dihedral_angle_3_deg12.614
r_dihedral_angle_1_deg5.475
r_scangle_it2.92
r_scbond_it1.912
r_angle_refined_deg1.233
r_mcangle_it0.994
r_mcbond_it0.662
r_nbtor_refined0.3
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.454
r_dihedral_angle_4_deg16.324
r_dihedral_angle_3_deg12.614
r_dihedral_angle_1_deg5.475
r_scangle_it2.92
r_scbond_it1.912
r_angle_refined_deg1.233
r_mcangle_it0.994
r_mcbond_it0.662
r_nbtor_refined0.3
r_nbd_refined0.198
r_symmetry_vdw_refined0.176
r_symmetry_hbond_refined0.12
r_xyhbond_nbd_refined0.107
r_chiral_restr0.085
r_bond_refined_d0.011
r_gen_planes_refined0.005
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3117
Nucleic Acid Atoms
Solvent Atoms398
Heterogen Atoms35

Software

Software
Software NamePurpose
REFMACrefinement