X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1MICROBATCH4.6298Calcium chloride, Sodium acetate, PEG 400
Crystal Properties
Matthews coefficientSolvent content
1.4112.72

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 34.96α = 90
b = 43.34β = 90
c = 78.84γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray93CCDRAYONIX MX-3002016-02-12MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONCLSI BEAMLINE 08ID-10.97949CLSI08ID-1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.2343.357810.58.227687

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONTHROUGHOUT1.3539.4223810125492.670.127950.125310.17709RANDOM18.322
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
1.11-0.96-0.15
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg41.3
r_sphericity_free32.917
r_dihedral_angle_3_deg13.947
r_sphericity_bonded11.841
r_dihedral_angle_1_deg6.879
r_rigid_bond_restr4.908
r_long_range_B_refined4.899
r_long_range_B_other4.183
r_scangle_other4.18
r_scbond_it3.62
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg41.3
r_sphericity_free32.917
r_dihedral_angle_3_deg13.947
r_sphericity_bonded11.841
r_dihedral_angle_1_deg6.879
r_rigid_bond_restr4.908
r_long_range_B_refined4.899
r_long_range_B_other4.183
r_scangle_other4.18
r_scbond_it3.62
r_scbond_other3.614
r_mcangle_it2.789
r_mcangle_other2.788
r_angle_refined_deg2.357
r_mcbond_it2.277
r_mcbond_other2.241
r_angle_other_deg1.207
r_chiral_restr0.18
r_bond_refined_d0.029
r_gen_planes_refined0.011
r_bond_other_d0.002
r_gen_planes_other0.002
r_dihedral_angle_4_deg
r_nbd_refined
r_nbd_other
r_nbtor_refined
r_nbtor_other
r_xyhbond_nbd_refined
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_refined
r_symmetry_vdw_other
r_symmetry_hbond_refined
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_scangle_it
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1001
Nucleic Acid Atoms
Solvent Atoms181
Heterogen Atoms8

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata reduction
Aimlessdata scaling
PHASERphasing