Ligand validation:1DY4

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 1DY4 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
1DY4_NAG_A_435	60%	70%	0.134	0.918	0.55	0.62	-	-	0	0	100%	0.9333
1DY4_NAG_A_436	3%	72%	0.347	0.68	0.47	0.61	-	-	0	0	100%	0.9333
7NYT_NAG_A_501	94%	61%	0.07	0.971	0.62	0.88	-	-	0	0	100%	0.9333
4D5I_NAG_A_1438	82%	58%	0.088	0.943	0.7	0.89	-	-	0	0	100%	0.9333
4C4C_NAG_A_1437	82%	63%	0.084	0.937	0.6	0.82	-	-	0	0	100%	0.9333
4D5V_NAG_A_1436	80%	57%	0.097	0.947	0.53	1.09	-	1	0	0	100%	0.8833
6GRN_NAG_A_501	78%	69%	0.101	0.942	0.41	0.76	-	-	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333
3PPS_NAG_B_760	100%	44%	0.028	0.993	0.57	1.57	-	3	0	0	100%	0.9333
5O59_NAG_A_601	100%	70%	0.024	0.993	0.3	0.85	-	-	0	0	100%	0.9333
5U7O_NAG_B_704	100%	88%	0.024	0.989	0.23	0.44	-	-	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.