GPP: GERANYL DIPHOSPHATE
GPP is a Ligand Of Interest in 1H47 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1H47_GPP_D_1157 | 1% | 40% | 0.545 | 0.768 | 1.01 | 1.31 | 2 | 2 | 2 | 0 | 100% | 0.33 |
1H47_GPP_A_1157 | 1% | 36% | 0.554 | 0.775 | 1.11 | 1.4 | 2 | 2 | 1 | 0 | 100% | 0.33 |
3ESJ_GPP_A_904 | 42% | 35% | 0.219 | 0.938 | 1.08 | 1.49 | 2 | 4 | 14 | 0 | 100% | 0.6121 |
3ERN_GPP_B_901 | 31% | 15% | 0.207 | 0.877 | 2.19 | 1.64 | 6 | 6 | 3 | 0 | 100% | 1 |
3ELC_GPP_C_904 | 16% | 14% | 0.275 | 0.849 | 2.29 | 1.59 | 7 | 4 | 2 | 0 | 100% | 1 |
3EOR_GPP_A_902 | 15% | 1% | 0.3 | 0.867 | 3.52 | 4.21 | 11 | 9 | 3 | 0 | 100% | 0.33 |
2GZL_GPP_A_903 | 4% | 18% | 0.4 | 0.794 | 2.03 | 1.54 | 5 | 4 | 0 | 0 | 100% | 0.33 |
2VG3_GPP_B_1298 | 100% | 7% | 0.05 | 0.994 | 2.78 | 2.12 | 3 | 5 | 0 | 0 | 100% | 1 |
4K7T_GPP_A_101 | 97% | 51% | 0.069 | 0.985 | 0.87 | 1.02 | 1 | - | 0 | 0 | 100% | 1 |
8A78_GPP_A_505 | 95% | 67% | 0.069 | 0.971 | 0.58 | 0.7 | - | - | 1 | 0 | 100% | 1 |
8A73_GPP_A_505 | 93% | 67% | 0.075 | 0.971 | 0.56 | 0.71 | - | - | 0 | 0 | 100% | 1 |
6PGN_GPP_A_402 | 91% | 55% | 0.085 | 0.973 | 0.68 | 1.04 | - | - | 2 | 0 | 100% | 1 |