CDL: CARDIOLIPIN
CDL is a Ligand Of Interest in 1PP9 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1PP9_CDL_Q_3003 | 14% | 43% | 0.21 | 0.846 | 1.08 | 1.14 | 4 | 4 | 0 | 0 | 50% | 0.5 |
1PP9_CDL_G_2004 | 12% | 40% | 0.254 | 0.88 | 1.12 | 1.2 | 2 | 4 | 5 | 0 | 44% | 0.44 |
1PP9_CDL_T_3004 | 11% | 42% | 0.258 | 0.871 | 1.14 | 1.1 | 4 | 2 | 0 | 0 | 49% | 0.49 |
1PP9_CDL_G_2003 | 4% | 44% | 0.273 | 0.739 | 1.09 | 1.07 | 2 | 4 | 0 | 0 | 50% | 0.5 |
5Y5S_CDL_M_415 | 41% | 34% | 0.128 | 0.953 | 1.32 | 1.27 | 3 | 3 | 1 | 0 | 39% | 0.39 |
2GNU_CDL_M_1309 | 38% | 22% | 0.122 | 0.984 | 1.77 | 1.5 | 3 | 3 | 0 | 0 | 10% | 10 |
3ZDQ_CDL_A_1721 | 37% | 64% | 0.215 | 0.943 | 0.72 | 0.65 | 4 | 4 | 0 | 1 | 84% | 0.42 |
6JY3_CDL_B_301 | 33% | 24% | 0.163 | 0.908 | 1.53 | 1.57 | 5 | 14 | 0 | 0 | 64% | 0.64 |
7COH_CDL_A_521 | 33% | 72% | 0.212 | 0.901 | 0.46 | 0.6 | - | 2 | 6 | 0 | 94% | 0.94 |