NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 1RD8 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1RD8_NAG_B_183 | 6% | 45% | 0.401 | 0.831 | 0.56 | 1.53 | - | 4 | 2 | 1 | 100% | 0.9333 |
1RD8_NAG_A_1 | 5% | 24% | 0.413 | 0.828 | 1.08 | 2.03 | 1 | 6 | 0 | 1 | 100% | 0.9333 |
1RD8_NAG_E_330 | 5% | 12% | 0.297 | 0.692 | 1.49 | 2.59 | 3 | 7 | 0 | 1 | 100% | 0.9333 |
1RD8_NAG_C_330 | 2% | 24% | 0.462 | 0.758 | 1.09 | 2 | 1 | 6 | 0 | 1 | 100% | 0.9333 |
1RD8_NAG_A_2 | 2% | 43% | 0.337 | 0.614 | 0.57 | 1.6 | - | 3 | 0 | 1 | 100% | 0.9333 |
1RD8_NAG_C_335 | 0% | 47% | 0.425 | 0.479 | 0.74 | 1.28 | - | 2 | 0 | 0 | 100% | 0.9333 |
5UG0_NAG_A_402 | 77% | 43% | 0.087 | 0.925 | 0.4 | 1.78 | - | 2 | 0 | 0 | 100% | 0.9333 |
2WRG_NAG_J_1328 | 73% | 24% | 0.091 | 0.918 | 0.64 | 2.44 | - | 6 | 3 | 0 | 100% | 1 |
5W6G_NAG_A_404 | 49% | 60% | 0.149 | 0.895 | 0.31 | 1.19 | - | 2 | 0 | 0 | 100% | 0.9333 |
3GBN_NAG_A_330 | 37% | 45% | 0.206 | 0.904 | 0.72 | 1.4 | 1 | 1 | 1 | 0 | 100% | 0.9333 |
4PY8_NAG_A_404 | 31% | 44% | 0.195 | 0.863 | 0.69 | 1.47 | - | 2 | 0 | 0 | 100% | 0.9333 |
3PPS_NAG_B_760 | 100% | 44% | 0.028 | 0.993 | 0.57 | 1.57 | - | 3 | 0 | 0 | 100% | 0.9333 |
4AKM_NAG_A_1379 | 100% | 67% | 0.029 | 0.994 | 0.54 | 0.73 | - | - | 0 | 0 | 100% | 0.9333 |
3CQL_NAG_B_244 | 100% | 68% | 0.029 | 0.987 | 0.42 | 0.8 | - | - | 0 | 0 | 100% | 1 |
3RIK_NAG_D_509 | 100% | 8% | 0.035 | 0.991 | 2.03 | 2.54 | 4 | 7 | 2 | 0 | 100% | 0.9333 |
5VEM_NAG_B_509 | 100% | 74% | 0.003 | 0.957 | 0.46 | 0.56 | - | - | 0 | 0 | 100% | 0.9333 |