NGT: 3AR,5R,6S,7R,7AR-5-HYDROXYMETHYL-2-METHYL-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-DIOL
NGT is a Ligand Of Interest in 2GK1 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2GK1_NGT_A_21 | 55% | 45% | 0.168 | 0.938 | 1.25 | 0.88 | 1 | 1 | 6 | 0 | 100% | 1 |
2GK1_NGT_D_24 | 48% | 42% | 0.181 | 0.926 | 1.38 | 0.88 | 2 | 1 | 4 | 0 | 100% | 1 |
2GK1_NGT_B_22 | 30% | 44% | 0.235 | 0.9 | 1.31 | 0.88 | 2 | 1 | 3 | 0 | 100% | 1 |
2GK1_NGT_F_26 | 23% | 44% | 0.226 | 0.848 | 1.31 | 0.88 | 2 | 1 | 2 | 0 | 100% | 1 |
2GK1_NGT_C_530 | 14% | 41% | 0.253 | 0.808 | 1.45 | 0.88 | 2 | 1 | 12 | 0 | 100% | 1 |
2GK1_NGT_E_530 | 11% | 42% | 0.251 | 0.77 | 1.39 | 0.88 | 3 | 1 | 6 | 0 | 100% | 1 |
2GK1_NGT_H_28 | 5% | 41% | 0.331 | 0.733 | 1.42 | 0.88 | 4 | 1 | 6 | 0 | 100% | 1 |
2GK1_NGT_G_533 | 5% | 43% | 0.349 | 0.749 | 1.34 | 0.87 | 2 | 1 | 8 | 0 | 100% | 1 |
2CHN_NGT_B_1717 | 100% | 11% | 0.044 | 0.984 | 2.8 | 1.44 | 1 | 1 | 0 | 0 | 100% | 1 |
2EPN_NGT_A_1650 | 96% | 17% | 0.071 | 0.98 | 2.36 | 1.32 | 3 | 2 | 0 | 0 | 100% | 1 |
4JAW_NGT_A_702 | 96% | 9% | 0.069 | 0.976 | 2.35 | 2.13 | 1 | 6 | 0 | 0 | 100% | 1 |
8K2I_NGT_A_702 | 92% | 45% | 0.095 | 0.986 | 1.11 | 1.03 | 1 | - | 2 | 0 | 100% | 1 |
3SUR_NGT_A_2000 | 90% | 10% | 0.095 | 0.976 | 2.93 | 1.37 | 3 | 2 | 0 | 0 | 100% | 1 |