PDC: PYRIDINE-2,6-DICARBOXYLIC ACID
PDC is a Ligand Of Interest in 2PC2 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2PC2_PDC_A_302 | 96% | 40% | 0.069 | 0.979 | 0.94 | 1.37 | 1 | 2 | 0 | 0 | 100% | 0.88 |
2PC2_PDC_A_303 | 95% | 40% | 0.079 | 0.981 | 0.8 | 1.51 | - | 5 | 0 | 0 | 100% | 0.88 |
2PC2_PDC_A_304 | 83% | 29% | 0.097 | 0.957 | 0.94 | 1.86 | 1 | 5 | 0 | 0 | 100% | 0.88 |
2PC2_PDC_A_402 | 80% | 38% | 0.098 | 0.947 | 0.85 | 1.57 | - | 5 | 0 | 0 | 100% | 0.44 |
2PC2_PDC_A_404 | 71% | 38% | 0.116 | 0.935 | 0.84 | 1.57 | - | 5 | 1 | 0 | 100% | 0.44 |
2PC2_PDC_A_403 | 69% | 37% | 0.117 | 0.931 | 0.85 | 1.58 | - | 5 | 1 | 0 | 100% | 0.44 |
2PC2_PDC_A_502 | 42% | 30% | 0.156 | 0.875 | 1.1 | 1.68 | 1 | 4 | 0 | 0 | 100% | 0.62 |
2PC2_PDC_A_504 | 33% | 25% | 0.161 | 0.84 | 1.1 | 1.93 | 1 | 6 | 0 | 0 | 100% | 0.62 |
2PC2_PDC_A_503 | 31% | 28% | 0.158 | 0.824 | 1.21 | 1.67 | 2 | 6 | 0 | 0 | 100% | 0.62 |
2PC2_PDC_A_602 | 12% | 25% | 0.273 | 0.802 | 0.95 | 2.05 | - | 6 | 0 | 0 | 100% | 0.39 |
2PC2_PDC_A_603 | 9% | 41% | 0.284 | 0.778 | 0.89 | 1.41 | - | 3 | 0 | 0 | 100% | 0.39 |
2PC2_PDC_A_604 | 6% | 33% | 0.288 | 0.712 | 0.99 | 1.66 | 1 | 4 | 0 | 0 | 100% | 0.39 |
2PC2_PDC_A_702 | 1% | 26% | 0.38 | 0.612 | 0.9 | 2.05 | - | 6 | 0 | 0 | 100% | 0.36 |
3LGR_PDC_A_304 | 100% | 3% | 0.041 | 0.984 | 2.77 | 3.13 | 6 | 11 | 0 | 0 | 100% | 0.5 |
8S3A_PDC_F_601 | 99% | 50% | 0.043 | 0.977 | 0.97 | 0.97 | - | - | 0 | 0 | 100% | 1 |
5TJZ_PDC_A_301 | 95% | 32% | 0.072 | 0.977 | 1.27 | 1.41 | 1 | 3 | 1 | 0 | 100% | 1 |
1ARZ_PDC_B_303 | 95% | 2% | 0.077 | 0.98 | 5.58 | 1.09 | 7 | 1 | 1 | 0 | 100% | 1 |
1P9L_PDC_B_402 | 89% | 2% | 0.086 | 0.964 | 4.67 | 1.85 | 7 | 5 | 0 | 0 | 100% | 1 |