Ligand validation:3DGA

UMP: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE

UMP is a Ligand Of Interest in 3DGA designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
3DGA_UMP_C_611	81%	17%	0.118	0.972	1.75	1.88	6	10	0	0	100%	1
3DGA_UMP_D_611	70%	16%	0.145	0.962	1.77	1.95	6	10	0	0	100%	1
1J3K_UMP_D_711	96%	17%	0.076	0.985	1.91	1.69	4	7	0	0	100%	1
1J3I_UMP_C_611	72%	13%	0.147	0.971	2.01	2	7	10	1	0	100%	1
1J3J_UMP_C_611	25%	12%	0.263	0.897	2.21	1.87	5	6	0	0	100%	1
3DG8_UMP_C_611	14%	12%	0.311	0.867	2.02	2.02	8	10	0	0	100%	1
3TPY_UMP_A_154	100%	40%	0.041	0.993	0.89	1.44	1	5	0	0	100%	0.3
3TQ4_UMP_A_777	100%	32%	0.038	0.99	1.04	1.65	1	8	0	0	100%	0.8
3TQ5_UMP_A_777	100%	22%	0.046	0.989	1.35	1.9	3	6	0	0	100%	1
3TQ3_UMP_A_777	100%	38%	0.049	0.99	0.91	1.5	1	5	0	0	100%	0.3
3TRN_UMP_A_777	99%	30%	0.047	0.987	1.2	1.58	2	6	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.