UDP: URIDINE-5'-DIPHOSPHATE

UDP is a Ligand Of Interest in 3HE3 designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3HE3_UDP_G_400 85% 36% 0.118 0.9850.94 1.55 1 700100%1
3HE3_UDP_B_400 85% 36% 0.116 0.9810.95 1.57 1 600100%1
3HE3_UDP_H_400 84% 36% 0.117 0.9810.95 1.54 - 600100%1
3HE3_UDP_F_400 83% 36% 0.111 0.9690.93 1.58 - 600100%1
3HE3_UDP_C_400 82% 36% 0.124 0.980.95 1.54 - 600100%1
3HE3_UDP_I_400 79% 36% 0.134 0.9810.94 1.57 1 700100%1
3HE3_UDP_J_400 75% 35% 0.149 0.9830.96 1.58 - 600100%1
3HE3_UDP_A_400 74% 37% 0.147 0.9770.94 1.51 - 620100%1
3HE3_UDP_D_400 72% 36% 0.15 0.9760.95 1.56 - 700100%1
3HE3_UDP_E_400 69% 38% 0.158 0.9730.93 1.5 - 510100%1
3MJ4_UDP_C_500 68% 34% 0.145 0.9560.86 1.72 1 600100%1
8VH8_UDP_C_704 100% 62% 0.032 0.9950.55 0.9 - 100100%1
4PHR_UDP_A_301 100% 42% 0.042 0.9890.84 1.41 - 400100%1
2B69_UDP_A_900 100% 42% 0.046 0.9921.03 1.21 2 400100%1
1GX4_UDP_A_401 100% 32% 0.046 0.9911.68 1.03 2 300100%1
3U2V_UDP_B_270 99% 33% 0.049 0.9891.12 1.52 2 600100%1