UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 3MQG designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
3MQG_UDP_F_193 | 22% | 22% | 0.223 | 0.846 | 1.14 | 2.07 | 2 | 10 | 0 | 0 | 96% | 0.96 |
3MQG_UDP_C_192 | 18% | 31% | 0.213 | 0.8 | 1.05 | 1.69 | 2 | 7 | 2 | 0 | 100% | 1 |
3MQG_UDP_B_192 | 8% | 30% | 0.26 | 0.74 | 1.05 | 1.71 | 2 | 8 | 1 | 0 | 100% | 1 |
8VH8_UDP_D_702 | 100% | 67% | 0.032 | 0.995 | 0.59 | 0.69 | - | - | 0 | 0 | 100% | 1 |
4PHR_UDP_A_301 | 100% | 42% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |
2B69_UDP_A_900 | 100% | 42% | 0.046 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
1GX4_UDP_A_401 | 100% | 32% | 0.046 | 0.991 | 1.68 | 1.03 | 2 | 3 | 0 | 0 | 100% | 1 |
3U2V_UDP_B_270 | 99% | 33% | 0.049 | 0.989 | 1.12 | 1.52 | 2 | 6 | 0 | 0 | 100% | 1 |