3OMA
TRD: TRIDECANE
TRD is a Ligand Of Interest in 3OMA designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
3OMA_TRD_A_3 | 40% | 86% | 0.203 | 0.915 | 0.37 | 0.34 | - | - | 1 | 0 | 100% | 1 |
3OMA_TRD_D_14 | 37% | 89% | 0.114 | 0.895 | 0.26 | 0.39 | - | - | 0 | 0 | 54% | 0.5385 |
3OMA_TRD_D_3 | 24% | 82% | 0.272 | 0.904 | 0.2 | 0.59 | - | - | 1 | 0 | 100% | 1 |
3OMA_TRD_A_552 | 21% | 85% | 0.245 | 0.857 | 0.27 | 0.47 | - | - | 0 | 0 | 100% | 1 |
3OMA_TRD_C_552 | 9% | 83% | 0.33 | 0.817 | 0.26 | 0.52 | - | - | 0 | 0 | 100% | 1 |
3OMA_TRD_A_1013 | 8% | 87% | 0.226 | 0.788 | 0.32 | 0.38 | - | - | 0 | 0 | 54% | 0.5385 |
3OMA_TRD_B_4 | 4% | 86% | 0.303 | 0.728 | 0.26 | 0.45 | - | - | 1 | 0 | 69% | 0.6923 |
3OMA_TRD_A_1009 | 3% | 87% | 0.301 | 0.742 | 0.31 | 0.37 | - | - | 0 | 0 | 54% | 0.5385 |
3OMA_TRD_A_1015 | 2% | 87% | 0.354 | 0.709 | 0.32 | 0.37 | - | - | 0 | 0 | 54% | 0.5385 |
6PW1_TRD_C_601 | 71% | 72% | 0.099 | 0.918 | 0.15 | 0.92 | - | - | 1 | 0 | 100% | 1 |
3DTU_TRD_A_1506 | 52% | 84% | 0.151 | 0.91 | 0.24 | 0.52 | - | - | 3 | 0 | 100% | 1 |
6PW0_TRD_D_302 | 43% | 73% | 0.196 | 0.921 | 0.12 | 0.9 | - | - | 0 | 0 | 100% | 1 |
3FYE_TRD_D_1007 | 29% | 81% | 0.221 | 0.881 | 0.23 | 0.59 | - | - | 1 | 0 | 100% | 1 |
3FYI_TRD_A_578 | 28% | 82% | 0.245 | 0.9 | 0.28 | 0.52 | - | - | 0 | 0 | 100% | 1 |
4ZR1_TRD_A_410 | 49% | 75% | 0.18 | 0.926 | 0.12 | 0.84 | - | - | 1 | 0 | 100% | 1 |
6LPK_TRD_A_2422 | 41% | 98% | 0.14 | 0.853 | 0.14 | 0.14 | - | - | 0 | 0 | 100% | 1 |
6LPJ_TRD_A_2422 | 38% | 98% | 0.154 | 0.855 | 0.13 | 0.16 | - | - | 0 | 0 | 100% | 1 |