UDP: URIDINE-5'-DIPHOSPHATE

UDP is a Ligand Of Interest in 3PE3 designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3PE3_UDP_D_1201 74% 44% 0.157 0.9871.15 1.02 1 100100%1
3PE3_UDP_A_1201 73% 45% 0.159 0.9861.15 0.98 1 100100%1
3PE3_UDP_B_1201 66% 45% 0.18 0.9861.1 1.02 1 100100%1
3PE3_UDP_C_1201 55% 41% 0.198 0.9691.13 1.16 1 210100%1
4GYW_UDP_C_1101 100% 37% 0.037 0.9881.03 1.45 2 400100%1
4GZ3_UDP_A_1101 99% 35% 0.045 0.9831.08 1.47 1 500100%1
4N39_UDP_A_1201 96% 37% 0.08 0.9870.91 1.53 - 500100%1
3PE4_UDP_A_1212 94% 36% 0.079 0.9761.03 1.49 2 400100%1
5LWV_UDP_A_1201 93% 27% 0.088 0.9831.04 1.87 2 1100100%1
8X3Q_UDP_C_401 100% 3% 0.015 0.9983.32 2.69 13 1300100%1
8X3U_UDP_B_401 100% 3% 0.012 0.9993.31 2.68 13 1320100%1
8VH8_UDP_C_704 100% 62% 0.032 0.9950.55 0.9 - 100100%1
2IV7_UDP_A_1372 100% 40% 0.035 0.9840.85 1.49 - 400100%1
4PHR_UDP_A_301 100% 42% 0.042 0.9890.84 1.41 - 400100%1