Ligand validation:4CXM

SPD: SPERMIDINE

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4CXM_SPD_C_640	62%	32%	0.136	0.927	1.03	1.67	1	2	2	0	100%	1
4CXM_SPD_A_640	56%	43%	0.136	0.907	0.78	1.39	-	1	3	0	100%	1
4CXM_SPD_B_640	49%	35%	0.143	0.889	0.45	2.08	-	2	4	0	100%	1
2PWP_SPD_A_401	21%	22%	0.311	0.926	0.53	2.67	-	3	5	0	100%	1
4C0Z_SPD_A_1223	95%	63%	0.064	0.966	0.7	0.73	-	-	3	0	100%	1
5JC9_SPD_DA_3190	92%	97%	0.089	0.979	0.12	0.19	-	-	0	0	100%	1
5J7L_SPD_DA_3187	90%	92%	0.094	0.978	0.19	0.33	-	-	0	0	100%	1
7XJM_SPD_B_401	90%	91%	0.078	0.961	0.25	0.33	-	-	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.