Ligand validation:4GDI

GOL: GLYCEROL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4GDI_GOL_A_510	77%	84%	0.117	0.956	0.31	0.44	-	-	0	0	100%	1
4GDI_GOL_F_514	71%	89%	0.11	0.93	0.34	0.31	-	-	0	0	100%	1
4GDI_GOL_C_509	70%	80%	0.133	0.951	0.34	0.5	-	-	0	0	100%	1
4GDI_GOL_A_511	65%	89%	0.157	0.96	0.45	0.2	-	-	1	0	100%	1
4GDI_GOL_F_513	62%	81%	0.124	0.915	0.34	0.48	-	-	0	0	100%	1
4GDI_GOL_E_512	56%	86%	0.148	0.921	0.47	0.25	-	-	0	0	100%	1
4GDI_GOL_F_515	45%	80%	0.16	0.891	0.34	0.49	-	-	0	0	100%	1
4GDI_GOL_A_512	37%	90%	0.23	0.929	0.43	0.18	-	-	1	0	100%	1
4GDI_GOL_B_512	34%	90%	0.177	0.859	0.31	0.3	-	-	0	0	100%	1
4GDI_GOL_E_513	28%	90%	0.162	0.812	0.35	0.26	-	-	0	0	100%	1
4GDI_GOL_F_512	25%	70%	0.246	0.881	0.54	0.6	-	-	0	0	100%	1
4GDI_GOL_D_508	15%	85%	0.204	0.763	0.37	0.37	-	-	1	0	100%	1
4GDI_GOL_E_511	5%	84%	0.259	0.67	0.33	0.43	-	-	1	0	100%	1
4GDI_GOL_B_511	3%	86%	0.223	0.536	0.31	0.4	-	-	0	0	100%	1
2YOQ_GOL_A_1196	100%	35%	0.024	0.996	0.38	2.12	-	2	0	0	100%	1
4KFD_GOL_D_806	100%	57%	0.024	0.995	0.41	1.21	-	-	0	0	100%	1
4KFE_GOL_E_803	100%	63%	0.024	0.995	0.31	1.07	-	-	0	0	100%	1
1M5Q_GOL_W_4006	100%	0%	0.027	0.992	4.89	6.2	5	3	0	0	100%	1
2Y3G_GOL_A_1150	100%	85%	0.029	0.995	0.36	0.39	-	-	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.