4PBU | pdb_00004pbu


HEM: PROTOPORPHYRIN IX CONTAINING FE

HEM is a Ligand Of Interest in 4PBU designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4PBU_HEM_e_101Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4PBU_HEM_e_101Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4PBU_HEM_e_101Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4PBU_HEM_e_101 10% 16% 0.408 0.9212.01 1.72 8 700100%1
4PBU_HEM_V_202 4% 16% 0.521 0.9041.95 1.74 8 800100%1
4PBU_HEM_v_202 3% 15% 0.568 0.9331.96 1.82 5 700100%1
4PBU_HEM_E_101 2% 16% 0.669 0.9311.92 1.79 7 900100%1
3WU2_HEM_V_201 100% 16% 0.042 0.9892.03 1.65 13 910100%1
5GTI_HEM_E_103 98% 22% 0.057 0.9791.34 1.88 6 1300100%1
8GN2_HEM_F_101 98% 15% 0.063 0.9821.92 1.83 5 1020100%1
5ZZN_HEM_F_101 97% 16% 0.063 0.9811.74 1.92 7 1210100%1
8GN0_HEM_F_101 97% 16% 0.064 0.9781.94 1.72 6 710100%1
1FHF_HEM_A_350 100% 17% 0.021 0.9971.8 1.82 12 340100%1
1HBH_HEM_A_144 100% 11% 0.019 0.9971.48 2.62 5 1250100%1
3EJE_HEM_B_405 100% 18% 0.022 0.9971.91 1.6 8 870100%1
3QU8_HEM_A_500 100% 18% 0.025 0.9981.95 1.59 6 6180100%1
2D2C_HEM_C_301 100% 10% 0.024 0.9992.21 2.15 5 1240100%1