Ligand validation:4RKD

PMP: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE

PMP is a Ligand Of Interest in 4RKD designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4RKD_PMP_H_401	87%	4%	0.113	0.984	3.92	1.91	3	6	4	0	100%	1
4RKD_PMP_D_401	87%	8%	0.115	0.986	2.84	1.78	3	4	7	0	100%	1
4RKC_PMP_B_405	72%	3%	0.139	0.965	3.61	2.67	5	9	9	0	100%	1
2QB3_PMP_A_700	99%	24%	0.05	0.985	2.08	1.04	4	-	0	0	100%	0.4
8TN3_PMP_B_501	99%	52%	0.058	0.99	0.87	0.99	-	1	0	0	100%	1
8PNX_PMP_A_301	99%	55%	0.053	0.984	0.56	1.16	-	2	0	0	100%	1
6HBV_PMP_A_502	99%	16%	0.061	0.992	2.55	1.19	3	2	0	0	100%	0.5
2QBT_PMP_A_700	99%	49%	0.062	0.99	0.88	1.09	1	1	0	0	100%	0.75

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.