4TNI | pdb_00004tni


PL9: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE

PL9 is a Ligand Of Interest in 4TNI designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4TNI_PL9_a_408Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4TNI_PL9_a_408Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4TNI_PL9_a_408Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4TNI_PL9_a_408 8% 33% 0.306 0.8081.07 1.56 3 100082%1
4TNI_PL9_D_407 2% 34% 0.415 0.6961.07 1.52 3 1300100%1
4TNI_PL9_A_406 2% 34% 0.405 0.7151.02 1.57 4 90082%1
4TNI_PL9_d_407 1% 34% 0.42 0.573 1.07 1.53 2 1400100%1
4TNI_PL9_j_101 1% 34% 0.348 0.52 1 1.57 2 70064%1
4TNI_PL9_J_101 0% 34% 0.594 0.241 1.02 1.56 2 70064%1
3WU2_PL9_d_405 98% 30% 0.047 0.9661.27 1.53 9 1300100%1
5B66_PL9_D_412 97% 35% 0.049 0.9641.06 1.51 3 1200100%1
5WS6_PL9_D_405 97% 37% 0.055 0.9670.69 1.76 2 21 00100%1
5B5E_PL9_d_406 96% 33% 0.054 0.9651.05 1.59 4 1200100%1
5GTI_PL9_d_405 96% 36% 0.053 0.9620.64 1.86 2 22 00100%1
1VF5_PL9_Q_1305 98% 4% 0.062 0.9843.4 2.39 21 16320100%1