4TNK | pdb_00004tnk


DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)

DGD is a Ligand Of Interest in 4TNK designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4TNK_DGD_c_516Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4TNK_DGD_c_516Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter4TNK_DGD_c_516Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
4TNK_DGD_c_516 33% 39% 0.211 0.9020.93 1.44 2 110094%1
4TNK_DGD_c_517 19% 41% 0.251 0.8430.9 1.4 2 900100%1
4TNK_DGD_C_514 14% 42% 0.304 0.8880.98 1.26 2 50080%1
4TNK_DGD_C_515 10% 39% 0.336 0.8530.93 1.42 1 120094%1
4TNK_DGD_c_515 10% 42% 0.337 0.8730.97 1.29 1 50080%1
4TNK_DGD_B_620 6% 41% 0.381 0.8350.94 1.34 - 70088%1
4TNK_DGD_b_625 4% 41% 0.368 0.7770.92 1.36 - 70088%1
4TNK_DGD_b_601 2% 39% 0.469 0.7961.05 1.32 4 70079%1
4TNK_DGD_C_516 1% 40% 0.431 0.640.88 1.43 - 1000100%1
4TNK_DGD_B_626 1% 39% 0.548 0.7521.06 1.31 3 70079%1
4TNK_DGD_a_408 0% 39% 0.501 0.562 0.97 1.39 - 80085%1
4TNK_DGD_D_407 0% 40% 0.717 0.6980.98 1.33 4 80095%1
4TNK_DGD_A_409 0% 39% 0.583 0.555 0.96 1.43 1 70085%1
4TNK_DGD_d_410 0% 40% 0.794 0.6240.95 1.36 2 90095%1
5GTI_DGD_h_103 96% 52% 0.05 0.9670.89 0.96 3 30094%1
5V2C_DGD_C_516 95% 43% 0.067 0.9830.89 1.29 5 100094%1
5WS6_DGD_h_103 92% 53% 0.065 0.9680.86 0.96 3 30094%1
3WU2_DGD_C_518 92% 45% 0.063 0.9650.79 1.31 3 90094%1
5B66_DGD_C_516 91% 46% 0.067 0.9650.89 1.2 2 70094%1
7M78_DGD_L_207 91% 40% 0.082 0.970.93 1.4 2 1440100%1